Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0182 ATGGAAAACGTTCCATTTGCTGTTGCGTCTAATCTCATTCACAGGTTGGCTTCCGCAGATTTTCTTGAATTTGGAATTCAATATGATGTGACGGAAGACTTGGAAGAGCTTAAGAACACTATTGAATCCATCAATTCTAAGCTCCGTGATGCCGACGATAAACAAGATCAAGATGATGGTGTGCGAGTTTGGATCAGAAGGTTCAAAAAAGTACTCCACACTGCAGATGACTCCTTAGATGACCTTGCTATCCAATTCAGGAGAGACAAATTGGGTGCAGAAGGAAAAGAAGTAGACAAGGTCCTTCTTTCCATTTCATCTTCAAATCAACTTCCTTTATACACTGAAATGCCTGACAAAATTAAAGAAATACGAGAAAGTTTTAATGGTGTGATAAAGGAAATGAAGGATTTGAATTTAAGCCCAACATCAGCGGTGGTTAAGCAAACTAATAGTGAACAGAGAGAAACATGTTCTTTTGTATTAGAATCAGATATCATTGGAAGAGATGATAGTAAGAAGGAGATTATTAGTCTGTTGAGACAACCTCATGAAAACCAAAAAATTTCTGTTATTGCCATTGTTGGCCTTGGTGGTTTGGGGAAGACAGCTCTTGCACAATTGGTGTATAATGACTTGGAAGTGCAGACTTTTTTCGATATGCAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTATGAAGAAAATATTAGAATCAATTACTGGTGACCAAGTTGAAGACAAGTTATCATTAGGCAACTTGCAAAGAAAACTTCATGAAGAAGTAAGAGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAAAGTCATGACAAATGGGCTGAATTGAGAATGTACTTGATGTGTGGCGCTCAAGATAGTAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCAAAGGCAATGACTGCTAGCACTTCCTATCCTTTGAAAGGTTTGACTGATGAAGCGTCTTGGACTTTGTTGAAGAGCATTGCATTTGAGGATGATTTCAAAAGAGTGAATCAAAATCTAGAATCAACGGGGAAAGAAATAGCCAAAAAATGTAAGGGGGTTCCACTAGCAGTTAAGACCCTGGGAGGCCTGTTAAGAAGACAAAACGAAGAAAGTGAATGGGAGAATGTTTTACTTGGTGACTTCTGGAAATTATGTGAAGAGCAAAAGAGTATCATGCCAATTCTAAAACTCAGTTACCGCAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTGTACCCCAAGGATTCAGAAATTCGAAAAGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTAAATGTTCAACTGGAAAACAGCACATGGAGGATGTTGGAAATCAATTTGTAAAGATGTTTTTGATGAACTCATTTTTTCAAGATGCAGAAAATGATGAATGCGGTGAGATCATTAGTTTTAAAATGCATGATTTAATACATGATCTTGCGATGCTTGTTGCTGGCAATGATTATTGTTACTTGGATAGTAAGGCAGAAACAGTTGAAGGTAGACCCATGCACGTATCGTTGGAATCTTATGAGGCCATTCATTTGTTGAAATCATTTGATCTGATCAGGCTGCGAACTTTGATCTTGCCTTTGATTTTGCCGTATCACTTCGAAGTGGAGGAATATCTGTCGGTTACTGCAAAGTTCAAATACTTACGTGTCTTGAGGATGCATCATCTCTCTGGTTCCACTGAAGATTTGAAGCATTTAAGATACCTTGATTTAATGCAACAAACAAGTCTTCCCAAATCTATGAGCAATCTTGTTTTCTTACAAACATTAAAATTGTGGGAGTGTGATGAAGAATCATTTTCAGAAGTAGTCACAAAATTAGTCAATCTGAGGTGCCTAGGTATTGCTTACCATGACACCTTGAGTAGAATGGCAATTGGGTTGGGAAAATTATGCTCATTGCAATTCTTATCGACCTTTGTTGTGGGAGACAGCCAAGAAATAAGATATGGCACACTAAATGAACTCAAGGACTTAAACCTAATAAGAGGCGAATTAGAAATTCAGTATCTCAAACGCGTCAGACAAGTGGCTCTGGAATCACAGCACGTAAATTTAAAAGAAAAAAAATTCCTTCAATCCTTGACTCTGGATTGGTCCAGTGAAGAGCACGGAGACATCTGTAACAGTGACAGCCTACAGTTATTGGAAAACCTTCAGCCCCACCGTAATCTCAAGCGGTTGAAGGTGATTGATTATCCAGGCATGCTTTTCTCAAATTGGCTTTCTCTCCTCACAAATGTTGTTGACATTAGTCTCTATTGTCTTCCTAATTGTCGCTGTCTAACGCCGTTGGAACGTCTCCCGTCCCTGAAGTCACTTGATATACAGGTTCTTCGTGAATTGGAATACATATATCTCTACGAAGATGGTTTTGCAGTAACCTTCTTCCCCTCTTTGGAGAACCTCGTATTAATTAATTGTCCCAAGCTCAGGGGATGGCGCAGGCGAGGAGACGATATCAATGATTCACATAATCTCTCCTCATCTCTTTCATTTCCTCGTTTTTCTCAACTGAATGTCTATGGCTGTCCAAAGTTGACTTGCATGCCTACTTTTCCAAAGGTTGAGAATTTGTTCTTGTATCACTGCAGTGCAGAGCCATTAATAGCAACACTAAACTCAACATGTTCAGCCGACTCGTCTTCCTCCGCTGCTCCTCTTTCCATACTCGAAGAATTGGCGATTTCTGTTCCTATGAATTTACCAAAAGGTTGGATGCAAAATCTGACTTCTCTCAAGTGTCTTCAAATTGGATGGTGTGACAGTGAAACACCGGAGGAATTTGAGACTGGGTTTAAGGACGACACCAACTGCCTTTCTTCTCTGCGAAAAATAAGCATAGTTACATGTGAAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATTGCTTCAGCACATCGACATCTACAATTGCCCAAATTTGGCATCGCTGCCCGAAGGAATGAGTCGTCTTAAGAACTTAAAGATCTTTGAGGTCAAGTGGTGTTCCCTCTTGCTTAAAGAGTGCCGAACAGAGACAAGTGCTGTTAGTCGCCAAATCGCACATATCCCACAAATTATCCTTCATGATTAG 3153 0.3945 MENVPFAVASNLIHRLASADFLEFGIQYDVTEDLEELKNTIESINSKLRDADDKQDQDDGVRVWIRRFKKVLHTADDSLDDLAIQFRRDKLGAEGKEVDKVLLSISSSNQLPLYTEMPDKIKEIRESFNGVIKEMKDLNLSPTSAVVKQTNSEQRETCSFVLESDIIGRDDSKKEIISLLRQPHENQKISVIAIVGLGGLGKTALAQLVYNDLEVQTFFDMQMWVCVSDNFDVKTIMKKILESITGDQVEDKLSLGNLQRKLHEEVRGKKYLLVLDDIWNESHDKWAELRMYLMCGAQDSKILVTTRSENVAKAMTASTSYPLKGLTDEASWTLLKSIAFEDDFKRVNQNLESTGKEIAKKCKGVPLAVKTLGGLLRRQNEESEWENVLLGDFWKLCEEQKSIMPILKLSYRNLSPEMRQCFAYCSLYPKDSEIRKDELIQLWMAQGYLKCSTGKQHMEDVGNQFVKMFLMNSFFQDAENDECGEIISFKMHDLIHDLAMLVAGNDYCYLDSKAETVEGRPMHVSLESYEAIHLLKSFDLIRLRTLILPLILPYHFEVEEYLSVTAKFKYLRVLRMHHLSGSTEDLKHLRYLDLMQQTSLPKSMSNLVFLQTLKLWECDEESFSEVVTKLVNLRCLGIAYHDTLSRMAIGLGKLCSLQFLSTFVVGDSQEIRYGTLNELKDLNLIRGELEIQYLKRVRQVALESQHVNLKEKKFLQSLTLDWSSEEHGDICNSDSLQLLENLQPHRNLKRLKVIDYPGMLFSNWLSLLTNVVDISLYCLPNCRCLTPLERLPSLKSLDIQVLRELEYIYLYEDGFAVTFFPSLENLVLINCPKLRGWRRRGDDINDSHNLSSSLSFPRFSQLNVYGCPKLTCMPTFPKVENLFLYHCSAEPLIATLNSTCSADSSSSAAPLSILEELAISVPMNLPKGWMQNLTSLKCLQIGWCDSETPEEFETGFKDDTNCLSSLRKISIVTCERLKALPDWICNLSLLQHIDIYNCPNLASLPEGMSRLKNLKIFEVKWCSLLLKECRTETSAVSRQIAHIPQIILHD* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0182 1050 Gene3D - 325 410 IPR042197 -
Apr10g0182 1050 Gene3D Ribonuclease Inhibitor 540 840 IPR032675 -
Apr10g0182 1050 Gene3D - 8 136 - -
Apr10g0182 1050 PANTHER OS05G0414200 PROTEIN 32 945 - -
Apr10g0182 1050 SUPERFAMILY L domain-like 490 888 - -
Apr10g0182 1050 Gene3D Ribonuclease Inhibitor 875 1041 IPR032675 -
Apr10g0182 1050 PANTHER DISEASE RESISTANCE PROTEIN RP 32 945 IPR044974 GO:0006952
Apr10g0182 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 425 IPR027417 -
Apr10g0182 1050 Gene3D - 411 500 IPR036388 -
Apr10g0182 1050 Gene3D - 147 321 IPR027417 -
Apr10g0182 1050 PRINTS Disease resistance protein signature 191 206 - -
Apr10g0182 1050 PRINTS Disease resistance protein signature 265 279 - -
Apr10g0182 1050 PRINTS Disease resistance protein signature 362 376 - -
Apr10g0182 1050 PRINTS Disease resistance protein signature 584 600 - -
Apr10g0182 1050 Coils Coil 34 54 - -
Apr10g0182 1050 SUPERFAMILY RNI-like 856 1024 - -
Apr10g0182 1050 Pfam NB-ARC domain 170 412 IPR002182 GO:0043531
Apr10g0182 1050 Pfam Rx N-terminal domain 10 96 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0182 Apr-Chr10 4267633 4273429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0182 189 499 WRKY Transcription Factor Family AT5G45050 23.676 1.82e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0182 - - aprc:113850108 1416.36