Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0179 ATGGATCGAGAATGGGGATCGAAGCCGGGAAGCGGTGGTGCGGCTTCGGCGCAGAACGAAGCCATCGACCGGCGAGAGCGGCTCCGGCGACTGGCGTTGGAGACAATAGATTTAGCGAAGGATCCATACTTCATGCGCAACCACCTCGGAAGCTACGAATGCAAACTCTGTCTGACACTCCACAACAACGAAGGTAACTACCTCGCCCACACGCAGGGCAAACGCCACCAAACCAACTTAGCCAAACGCGCCGCTCGCGAAGCCAAAGACGCCCCCGCCCAACCCCAACCTCACAAACGCAAAGTTTCCCTTCGCAAAACCGTTAAGATTGGTCGCCCTGGCTATCGCGTCACTAAGCAGTTCGACCCTGAGACCAAGCAGAGATCTCTCCTTTTCCAGATTGAATATCCTGAGATTGAAGACCTTACGAAACCCAGGCACCGGTTTATGTCTTCATATGAGCAGAGGGTGCAACCATTTGATAAAAGATATCAGTATCTTTTGTTTGCTGCTGAACCATATGAAATAGTTGCTTTCAAGGTACCTAGCACAGAGATTGACAAGTCCACTCCAAAGTTTTTCTCACACTGGGACCCTGACTCAAAGATGTTCACACTGCAATTGTATTTTAAAACCAAGCCACCAGAGGCAAACAAACCACAGCCTCCCTCTACAGCTAATGGCACCCCAGCATCCAGTGTGCCACCGAGGCCATTGCCTCCACCACCCCAAGCTCCACTACCACCACCTCCACCTCCTCCACAAGGGCTCCCTCCTGGTGCACCTACAACAAATCCTCCTAGAGCTCCTCCACCTCCAATGCCAGGATCAATGCCACCTCCTCCTCCTATGTCTGCAAATGGTCCTAGACCTGCTCCACCTGGTGGAATGCCATCTGTCCCACCCCCGCCCCCTGTTGGCAGTGGCCCACCTTCGGGTTTTAACATGGGTTCTAGACCTCCGTCAATGCCACCTCCACAAGGTTTTCCAGCCCAACAAATGCAGAGCCAGGGTGTCCGTCTTCCTCCACCACCCCCTAACATGGGATAG 1050 0.5352 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVSLRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPPSTANGTPASSVPPRPLPPPPQAPLPPPPPPPQGLPPGAPTTNPPRAPPPPMPGSMPPPPPMSANGPRPAPPGGMPSVPPPPPVGSGPPSGFNMGSRPPSMPPPQGFPAQQMQSQGVRLPPPPPNMG* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0179 349 Gene3D - 94 218 - -
Apr10g0179 349 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
Apr10g0179 349 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Apr10g0179 349 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Apr10g0179 349 MobiDBLite consensus disorder prediction 1 21 - -
Apr10g0179 349 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Apr10g0179 349 MobiDBLite consensus disorder prediction 233 310 - -
Apr10g0179 349 Gene3D Classic Zinc Finger 46 89 - -
Apr10g0179 349 MobiDBLite consensus disorder prediction 213 349 - -
Apr10g0179 349 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 273 - -
Apr10g0179 349 SMART CactinC_cactus_3 89 217 - -
Apr10g0179 349 Pfam Zinc-finger of C2H2 type 52 76 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0179 1 296 C2H2 Transcription Factor Family AT2G32600 76.014 1.96e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0179 K12826 - gmx:100818114 450.284