Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0159 ATGCCTTTGGAGGACTTCTACAAGATACTTGATGCAACAAAGCTCAGAAGTCTGTTTTGGACTGCATGGCAGCCATTAGAATCCCCATGTTTGTTGGAGCATGTAATTCTACCAGTAGAACTTGGGTTCTTTGTGATCTTGTTAGTCCAACTCCTAAGAAAATATATGAACTTGATCAGAAAGCAAAACAAGGTCCCTGATAGTGCTTCCAAGATGATGCATCAAAATTCAATCAAATTTGGTTTTGCTTATAAAGTTAGCATTGTTTGCACCACATTATTGCTGGCTGTTCATGCATTATTGCTAATACTGATGCTCAATCATGATGAGACTCAATGTACCTCTAAACTTGAGGCTTTTACATCAGAGATAGTTCAAGTATTATCATGGGCAATTAGTCTTATAGCAATGTGCAAGATACCAAAATCCAGTACTTATTTCCCTTGGATTCTAAGGGCTTGGTGGCTTTGCAGTTTTATTTTGGGTGTTATAAGCACAGCACTTCATGCCCATTTCAGCTTCACCAACATGGGTCAAATTAGTGTAAGAGAATATGCAGACCTTCTTGGTTTGCTTGCTTCAACATGCCTTTTGGTTGTTTCAACAAGAGGGAAAACAGGCACTGTTTTAATTGCTACAGATGGTATATCTGAACCACTTCTAGGAGAGAAAACTGAGAAAAGTTCTGGGTTTCAAAGGGAATCACCATATGGAAAAGCCACTCTTCTCCAACTCATTAACTTCTCCTGGCTCAACCCTTTGTTTGCAGTAGGGTATAAGAAACCCCTTGAACAGGATGACATTCCTGATGTTGACATCAAGGACTCTGCTGAATTTCTAACATGCTCCTTTGATGAAAGTCTTAGACAAGTTAAGGAGAGTGATGGAACTACAAACCCTTCTATCTACAAGACAATCTATTTATTTGCAAGGAAGAAAGCAGCAATCAATGCAATGTTTGCAGTGATAAATGCTTCAGCATCATATGTTGGCCCATACTTGATCACTGACTTTGTGGATTTCCTTGGCGAAAAGGAAATTCGCGGATTAAAGAGTGGCTACCTTCTGTCACTAGGCTTCTTATGTGCCAAAATAGTTGAGACCATAGCTCAGAGGCAATGGATTTTTGGTGCCAGGCAATTAGGCCTTCGCCTTAGAACCGCATTGATAGCACATATATATAAAAAGGGCTTGAATCTGTCAAGTAGATCACGGCAAAGTCATACTGGTGGTGAGATAATGAACTACATGAGTGTAGATGTGCAGAGAATCACAGATTTTGTTTGGTATGTGAATGTAATATGGATGCTGCCTATACAAATTTCTTTAGCAGTATTCATTTTGCATACAAATCTAGGCTTAGGTTCATTGGCTGCATTAGCTGCTACATTGGCAGTGATGACTTTGAATATACCTCTCACAAAGATACAGAAAAGATACCAAGCCAGGATCATGGAGGCTAAGGACAACAGGATGAAAGCCACTTCAGAAGTCCTCAGAAACATGAGGACTTTGAAACTTCAAGCATGGGATAGTCAATTTTCTCAAAGGCTAGAAGCACTGAGGCAAGTAGAGTATGATTGGTTATTGAAGTCATTGAGGCAAGCGGCATTTTCTGCTTTTATCTTCTGGGGGTCACCCACATTCATTTCGGTGATAACCTTTTGGTCATGTATGTTAATGGGCATTGAACTGACAGCAGGAAGGGTCTTATCTGCATTTGCCACGTTTAGAATGTTGCAGGATCCTATATTTAGTCTACCTGATTTACTCAATGTCATTGCTCAAGGAAAAGTTTCTGTTGATAGGATTGCTTCTTTCCTCAAGGAGGAAGAAATCCAACATGATGTCATTGAATATGTTGCAAAAGACAAAACAGAATTTGACGTAGTTATTGAGAAAGGAAGATTCAGCTGGGATCCTGAGTCAACAACTTCAACCATTGATGAAATAGAGTTGAAAGTTAAGAGAGGGATGAAGGTGGCAATTTGTGGTTCTGTAGGTTCAGGAAAGTCTAGTCTTCTCTCAGGCATTTTGGGAGAAATATATAAACAGTCTGGAACAGTGAAGATTAGTGGAACAAAAGCTTATGTTCCACAATCAGCATGGATACTCACTGGAAATATAAGGGACAATATCACCTTTGGAAAAGAGTACAATGGTGATAAGTATGAGAAAACTATTGAGGCATGTGCATTGAAAAAGGACTTTGAGCTATTCTCATGTGGTGACCTGACAGAGATCGGAGAAAGAGGGATTAATATGAGTGGAGGACAGAAGCAAAGGATACAAATAGCTAGAGCAGTTTACCAGGATGCTGACATTTACCTTTTTGATGATCCTTTTAGTGCTGTTGATGCTCATACAGGCACTCATCTCTTTAAGGAGTGCCTTATGGGAATTCTCAAAGAGAAAACTATACTTTTTGTCACTCACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTAATGCAAAATGGAAGGATAGCACAAGCTGGAAAATTTGAAGAACTTCTAAAGCAAAATATAGGATTTGAAATTTTAGTTGGTGCACATAGCAAAGCTCTGGACTCAGTTCTTATGGTTGAAAATTCAAGTAGAACAAATTTAAATCCAATAGCTGAAGAAGGGGAATCTAACGTCAATTCAAACTCAAGTCTTCAACTTGTGCACACACAGCATGACACAGTGCAGGACAATCCTCCAGAGAGCAAAGGAAATGATGGAAAGTTGGTGCAAGATGAAGAAAGAGAAAGAGGAAGCATAGCAAAAGAAGTTTACTGGTCTTATTTGACCACTGTTAAAGGGGGAGTGCTAGTTCCACTCATAATCTTGGCACAATCTTCATTCCAAATACTTCAGATTGCCAGTAACTATTGGATGGCTTGGGTTTGTCCTACAAGTAGTGATGCAAAGCCTATATTTGACATGAATTTCATACTACTTATTTATATGCTACTCTCAGTTGCTGGTTCATTGTGTGTTCTGGTGAGAGCCATGTTGTTGTTAAATGCTGGGCTTTGGACAGCTCAGACACTTTTCACAAGAATGTTGCATAGTGTTCTCCGAGCCCCCATGGCATTTTTTGATTCTACTCCAACTGGAAGAATTTTGAATAGAGCCTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCAAACAAAATAGGATGGTGTGCTTTCTCAGTAATACAGATTCTAGGCACTATTGCAGTTATGTCTCAAGTGGCATGGCAAGTATTTGTCATCTTCATTCCAGTAACTGGAGTCTGCATATGGTATCAAAGATATTATACTCCAACAGCAAGAGAACTGGCTCGCTTAGCACAGATTCAAATTACTCCAATTCTCCACCACTTTTCAGAATCTTTAGCAGGAGCAGCGCCGATACGAGCTTTCGATCAAGAAGGCCGTTTCGTACACACAAATCTTCTTCTTATAGATGGTTTCTCAAGGCCATGGTTTCATAATGTATCTGCAATGGAATGGCTGTCTTTCAGATTGAATTTGCTTTCAAACTTTGTTTTTGCCTTCTCACTGGTCTTGCTAGTGAGCCTCCCTGAAGGAATAATCAATCCAAGTATAGCAGGGTTGGCAGTAACATATGGGATCAATCTGAATGTCTTGCAAGCTTCAGTTATATGGAACATATGCAATGCAGAAAACAAGATGATATCAGTTGAAAGAATTCTTCAGTATACAAAGATAGCAAGTGAAGCACCCCTTGTGATTGAAGACCGCAGGCCACCAAGCAACTGGCCAGAAATCGGAACAATATGTTTCAAAAATTTGCAGATACGTTATGCTGAACATTTACCATCCGTGTTGAAAAACATCACTTGCACATTTCCTGGAAGGAAGAAAATTGGTGTTGTGGGGCGAACTGGGAGTGGAAAATCAACCCTCATACAGGCTCTTTTCAGGATTGTTGAACCAAGAGAAGGAAGCATTGTAATTGACAATGTGGACATATGCAAGATAGGTCTCCATGACTTAAGGTCAAGGCTTAGCATTATCCCACAAGACCCTGCCTTGTTTGAAGGGACTGTTAGAGGAAACCTGGACCCACTGCAGCAATACTCTGACATTGACGTGTGGGAGGCTCTAGATAAATGTCAGCTTGGTCACCTAGTGAGGGCCAAGGAAGACAAGTTGGACAGCCCAGTGGTTGAAAATGGTGATAACTGGAGTGTGGGCCAAAGGCAATTATTTTGCCTTGGAAGAGCCCTGTTGAAGAGAAGTAGCATATTGGTACTAGATGAAGCAACAGCCTCAGTGGATTCTGCAACTGATGGGGTGATACAGAATATCATAAGTCAAGAGTTCAAAGATAGGACTGTTGTCACAATAGCTCATCGAATCCACACTGTTATTGATAGTGATTTGGTTTTGGTGCTCAGTGATGGGAGAATTGCTGAGTATGATGAACCATCAAAGTTACTTGAGAGAGAAGATTCCTTCTTCTTTAAACTCATAAGGGAGTACTCTAGAAGATCACATAGCTTCAACAGCTTGGCAACTCAACATGTCCAAAGCAGGGAATAA 4551 0.4028 MPLEDFYKILDATKLRSLFWTAWQPLESPCLLEHVILPVELGFFVILLVQLLRKYMNLIRKQNKVPDSASKMMHQNSIKFGFAYKVSIVCTTLLLAVHALLLILMLNHDETQCTSKLEAFTSEIVQVLSWAISLIAMCKIPKSSTYFPWILRAWWLCSFILGVISTALHAHFSFTNMGQISVREYADLLGLLASTCLLVVSTRGKTGTVLIATDGISEPLLGEKTEKSSGFQRESPYGKATLLQLINFSWLNPLFAVGYKKPLEQDDIPDVDIKDSAEFLTCSFDESLRQVKESDGTTNPSIYKTIYLFARKKAAINAMFAVINASASYVGPYLITDFVDFLGEKEIRGLKSGYLLSLGFLCAKIVETIAQRQWIFGARQLGLRLRTALIAHIYKKGLNLSSRSRQSHTGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVFILHTNLGLGSLAALAATLAVMTLNIPLTKIQKRYQARIMEAKDNRMKATSEVLRNMRTLKLQAWDSQFSQRLEALRQVEYDWLLKSLRQAAFSAFIFWGSPTFISVITFWSCMLMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLKEEEIQHDVIEYVAKDKTEFDVVIEKGRFSWDPESTTSTIDEIELKVKRGMKVAICGSVGSGKSSLLSGILGEIYKQSGTVKISGTKAYVPQSAWILTGNIRDNITFGKEYNGDKYEKTIEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFKECLMGILKEKTILFVTHQVEFLPAADLILVMQNGRIAQAGKFEELLKQNIGFEILVGAHSKALDSVLMVENSSRTNLNPIAEEGESNVNSNSSLQLVHTQHDTVQDNPPESKGNDGKLVQDEERERGSIAKEVYWSYLTTVKGGVLVPLIILAQSSFQILQIASNYWMAWVCPTSSDAKPIFDMNFILLIYMLLSVAGSLCVLVRAMLLLNAGLWTAQTLFTRMLHSVLRAPMAFFDSTPTGRILNRASTDQSVLDLEMANKIGWCAFSVIQILGTIAVMSQVAWQVFVIFIPVTGVCIWYQRYYTPTARELARLAQIQITPILHHFSESLAGAAPIRAFDQEGRFVHTNLLLIDGFSRPWFHNVSAMEWLSFRLNLLSNFVFAFSLVLLVSLPEGIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTKIASEAPLVIEDRRPPSNWPEIGTICFKNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQALFRIVEPREGSIVIDNVDICKIGLHDLRSRLSIIPQDPALFEGTVRGNLDPLQQYSDIDVWEALDKCQLGHLVRAKEDKLDSPVVENGDNWSVGQRQLFCLGRALLKRSSILVLDEATASVDSATDGVIQNIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFFKLIREYSRRSHSFNSLATQHVQSRE* 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0159 1516 SUPERFAMILY ABC transporter transmembrane region 941 1243 IPR036640 GO:0005524|GO:0016021
Apr10g0159 1516 CDD ABCC_MRP_domain1 630 830 - -
Apr10g0159 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 625 845 IPR027417 -
Apr10g0159 1516 Gene3D ABC transporter type 1, transmembrane domain 288 616 IPR036640 GO:0005524|GO:0016021
Apr10g0159 1516 MobiDBLite consensus disorder prediction 894 919 - -
Apr10g0159 1516 CDD ABC_6TM_ABCC_D2 942 1236 IPR044726 GO:0140359
Apr10g0159 1516 Pfam ABC transporter 649 782 IPR003439 GO:0005524
Apr10g0159 1516 Pfam ABC transporter 1278 1426 IPR003439 GO:0005524
Apr10g0159 1516 ProSitePatterns ABC transporters family signature. 755 769 IPR017871 GO:0005524
Apr10g0159 1516 Coils Coil 477 497 - -
Apr10g0159 1516 Pfam ABC transporter transmembrane region 317 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0159 1516 Pfam ABC transporter transmembrane region 953 1188 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0159 1516 Gene3D - 628 858 IPR027417 -
Apr10g0159 1516 CDD ABCC_MRP_domain2 1259 1479 - -
Apr10g0159 1516 PANTHER - 104 1504 - -
Apr10g0159 1516 Gene3D ABC transporter type 1, transmembrane domain 907 1242 IPR036640 GO:0005524|GO:0016021
Apr10g0159 1516 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 853 IPR003439 GO:0005524
Apr10g0159 1516 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 320 596 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0159 1516 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1263 1495 IPR003439 GO:0005524
Apr10g0159 1516 Gene3D - 1244 1496 IPR027417 -
Apr10g0159 1516 SMART AAA_5 657 830 IPR003593 -
Apr10g0159 1516 SMART AAA_5 1287 1479 IPR003593 -
Apr10g0159 1516 SUPERFAMILY ABC transporter transmembrane region 311 612 IPR036640 GO:0005524|GO:0016021
Apr10g0159 1516 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 944 1224 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0159 1516 CDD ABC_6TM_ABCC_D1 316 604 IPR044746 GO:0140359
Apr10g0159 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1253 1490 IPR027417 -
Apr10g0159 1516 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 104 1504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0159 Apr-Chr10 4000313 4012979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0159 624 844 Calmodulin-binding Proteins AT2G36910 30.802 1.97e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0159 - - gmx:100809749 2668.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0159 10 4000313 4012979 Apr10g0159 10 4000313 4012979 ECH