Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0149 ATGAGCCCTCCCTATTATTCCCTTTTGTTCACTCTCACAATCCTATTGAGTTCTTTCCATTGTTGTCTTTGTGCCAATCGTCTCATCCGACAAACATGCAAGAATTGCTCAAATAGTGATCCCAACATAAGCTACAAATTTTGCATAACATCTTTCCAATCAGACCGTAGAAGTCACTGTGCCAAAACCCTCCAAGAACTAGGCCTAGTTTCCATCAAGCTAGTAAGGCACAACGTGACAAATACTAGTGCTCACATCAACGAGCTTTTGAACCAAAATAAGGGCTTAGACCCATTCATCAAAGAATGCTTAGATGATTGCCTTGAAGTTTATTCTGACGCCATTTCAACTCTTAGAGGAGCCATTAGAGATTACAAGGCCAAGCGCTATGGTGATTCAAATATCAAGCTAAGCTCAGTCATTGATGCCTCTACCACATGTGAGGATGGATTCAAGCAAAAGAACGATGTCGTTTCGCCATTAACAAAGAGAAACAAGGATACTTTTCAGCTTTCCGCTATAGCACTTTCCATTGTTAACATGCTCATCGATACGGAGAAATTAAAGGGCACAGTTTGA 579 0.4076 MSPPYYSLLFTLTILLSSFHCCLCANRLIRQTCKNCSNSDPNISYKFCITSFQSDRRSHCAKTLQELGLVSIKLVRHNVTNTSAHINELLNQNKGLDPFIKECLDDCLEVYSDAISTLRGAIRDYKAKRYGDSNIKLSSVIDASTTCEDGFKQKNDVVSPLTKRNKDTFQLSAIALSIVNMLIDTEKLKGTV* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0149 192 CDD PMEI-Pla_a_1_like 33 181 IPR034088 -
Apr10g0149 192 Pfam Plant invertase/pectin methylesterase inhibitor 28 178 IPR006501 GO:0004857
Apr10g0149 192 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 182 IPR006501 GO:0004857
Apr10g0149 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 183 IPR035513 -
Apr10g0149 192 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 7 181 - -
Apr10g0149 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 182 IPR035513 -
Apr10g0149 192 PANTHER PECTINESTERASE 7 181 - -
Apr10g0149 192 SMART PMEI_2 24 178 IPR006501 GO:0004857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0149 70 186 Carbohydrate Esterase AT3G14310 28.125 1.87e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0149 - - gmx:100306248 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0149 10 3698296 3698902 Apr10g0149 10 3698296 3698902 ECH