Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0140 ATGCGTGTTATGTCATTGACATGCAAAAGCAATTGGTTCAAAGTATCTGTACTTCTGATTTTGAAGATAAATCTCGACAATGGCTGTCTCAAACAACGTATGTACCCATCTGACGTTGGTGCACTAGAGCTGAGATACATGTCTCTTCAACCAAGAAAAGGAAACATTGCCACAAAGGTCCCTTTGTATGACGATCCTTGGAAGATAAAAAAGGTGTTGAAAGAGAGTGATCTTGGCAACATGAGTAGGCTCATGCTAGGGAAGGATTTGGCAGAAAAGTTTGTGTTACCTGTGTTGGGTGATGCTGCTGAGATTGAGAAGGGAGTTAGTGTTAAGATTTGGGATGTGGACACCTACACCATGCACTCTCTTGTTTTCAAGAAATGGGCTTCTTCAAGATGCTACATTTTTATGGGAAAATGGGTCCAAGATTTTGTCAAGAGAAGGGGCTTGAAGAAAGGGGATGAGATTGGCTTTTACTGGGATCCATATAATAGTCACTTCAATTTCTCTGTTCTTAGAGTCAATTAA 531 0.4049 MRVMSLTCKSNWFKVSVLLILKINLDNGCLKQRMYPSDVGALELRYMSLQPRKGNIATKVPLYDDPWKIKKVLKESDLGNMSRLMLGKDLAEKFVLPVLGDAAEIEKGVSVKIWDVDTYTMHSLVFKKWASSRCYIFMGKWVQDFVKRRGLKKGDEIGFYWDPYNSHFNFSVLRVN* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0140 176 CDD B3_DNA 67 174 IPR003340 GO:0003677
Apr10g0140 176 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 51 174 - -
Apr10g0140 176 SUPERFAMILY DNA-binding pseudobarrel domain 65 174 IPR015300 -
Apr10g0140 176 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 51 174 - -
Apr10g0140 176 Gene3D - 66 173 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0140 Apr-Chr10 3566058 3566739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0140 69 162 B3 DNA Binding Superfamily AT3G24650 35.106 5.36e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0140 - - aprc:113850605 365.155