Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0138 ATGGCTGTCTCAAACAACGTATGTACCCATCTGACGTTGGGTAAGTGTCCATGTACTGCAGCAGAGACAGAAGAGAGTGATTCCAACAGCAACGAGGTTTGCACCCATTTAACGTTGAGTGTGTGTCAGTGCACTAGAGCTGAGATACATGTCTCTTCAACCAAGAAAAGGAAACATTGCCACAAAGGTCCCTTTGTTGCAAAAAAGAAGGCATGCAAAGACTTGGTGGTACAAGAGGATGCTCTGGTGGTACACGATGATGACGATCCTTGGAAGATAAAAAAGGTGTTGAAAGAGAGTGATCTTGGCAACATGAGTAGGCTCATGCTAGGGAAGGATTTGGCAGAAAAATTTGTGTTACCTGTGTTGGGTGATGCTGCTGAGATTGAGAAGGGAGTTAGTGTTAAGATTTGGGATGTGGACACCTACACCATGCACTCTCTTGTTTTCAAGAAATGGGCTTCTTCAAGATGCTACATTTTTATGGGAAAATGGGTCCAAGATTTTGTTAAGAGAAGGGGCTTGAAGAAAGGGGATGAGATTGGCTTTTACTGGGATCCATATAATAGTCACTTCAATTTCTCTGTTCTTAGAGTCAATTAA 603 0.4262 MAVSNNVCTHLTLGKCPCTAAETEESDSNSNEVCTHLTLSVCQCTRAEIHVSSTKKRKHCHKGPFVAKKKACKDLVVQEDALVVHDDDDPWKIKKVLKESDLGNMSRLMLGKDLAEKFVLPVLGDAAEIEKGVSVKIWDVDTYTMHSLVFKKWASSRCYIFMGKWVQDFVKRRGLKKGDEIGFYWDPYNSHFNFSVLRVN* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0138 200 Gene3D - 84 196 IPR015300 -
Apr10g0138 200 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 25 198 - -
Apr10g0138 200 SUPERFAMILY DNA-binding pseudobarrel domain 88 198 IPR015300 -
Apr10g0138 200 CDD B3_DNA 91 198 IPR003340 GO:0003677
Apr10g0138 200 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 25 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0138 Apr-Chr10 3540217 3542397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0138 83 186 B3 DNA Binding Superfamily AT3G24650 33.929 3.02e-11 60.1