Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0124 ATGGTGGATTCCGTTTCTTCTTCGTCACATGTTCCCCGGTGGCTTCATGTCCTCCTCACTGAGAAGTTCTACAACGCTTGCATAATTCATGAAGAGGCAAAGAAGAACGAAAAGAACGTTTATTGTTTGGATTGTTGCATCAGTCTCTGCCCTCACTGCTTGTCCCCTCACCGCTCTCACAGACTCTTACAGATTAGAAGATATGTGTATCACGATGTCATAAGGTTGGATGATGCTGCCAAGTTAATTGACTGCACTTATGTTCAATCCTACACCACCAACAGTGCAAAAGTGGTATTTTTAAACCAAAGGCCACAGACAAGGAACTTCAGAGGCTCCGGCAATTTCTGCAGCACCTGTGACAGAAGTCTGCAAGACCCATACCAGTTCTGCTCCCTCTCTTGCAAGATCAATCACCTCATCAAAACAACGGGTTCTCTCTGCGGTTACCTCTTCGAGTGCAACTATTTGCCGTTGCCGGAATCTGGGCTAGACGATGGTTTAATGACCCCTGACTCGGTTCTAGAACCGGCCGGTTCGGCCCGAACCTCGTCCGGTTCGGGTGGCTATGGTGGGGTGGATTGCAGGACCACCCTAGCTTGCACTGCCACCACCGAGATTGTGAGGAAGAAGAGGACCGGCGGCTCTACTTTCCGGCCACCGTGCCGACCTGCTTGCTCGCCGGTGTCGGAAATCTCGGCGGGTCTGATGAATCGGAGGAAAGGGAATCCCCAGAGGGCCCCACTGTATTGA 753 0.5126 MVDSVSSSSHVPRWLHVLLTEKFYNACIIHEEAKKNEKNVYCLDCCISLCPHCLSPHRSHRLLQIRRYVYHDVIRLDDAAKLIDCTYVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCSTCDRSLQDPYQFCSLSCKINHLIKTTGSLCGYLFECNYLPLPESGLDDGLMTPDSVLEPAGSARTSSGSGGYGGVDCRTTLACTATTEIVRKKRTGGSTFRPPCRPACSPVSEISAGLMNRRKGNPQRAPLY* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0124 250 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Apr10g0124 250 PANTHER - 12 250 - -
Apr10g0124 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 250 - -
Apr10g0124 250 Pfam PLATZ transcription factor 66 137 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0124 Apr-Chr10 3119918 3121300 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Apr10g0124 PLATZ 4.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0124 - - gmx:100787153 487.263