Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0063 ATGCAGCTCAATCGCCTATGCATTGTTTTACCACCAAAATCTGGTGAAATGATGCAACCATTTGAAAAGGGTGTCCAACAACAACCCTTTCAAACAGCAAAGAAACAAGATAAGGCTAAACAACCTCAAAGGGCTTGTGGGGGGCAAGTTCTTGATTTGCTCCGTGATTCTTTGATCAAGTTCTATGACTCAGGGTGGTGGAGAATTTGCCAAAGAGGAGAGCACAAAGAGAACAAGAACTCTGGTTTGTTGTTTCATGACATGGATGGTGTGCAAGTTTCTGTCAACATTGGCTCGGACAACCCAAGGATTTTCAGTTATGCAGAGCTTTTCATAGGGTCAAATGGTTTCTGTGAAGACCAAGTTCTAGGGAGTGGAGGGTTTGGCAAAGTTTATAAGGCTGTTTTACCAAGTGATGGAACAGTGGTTGCTGTGAAGTGCTGTTTAGAAGAGAAAGGAAAACAATTTGAGAAGAGTTTTGCAGCAGAATTAACAGCTGTGGCAGATCTTCGCCACAAGAATCTTGTGAGGTTGAGGGGTTGGTGTGTTCATGAAGATCAATTGCACCTTGTCTATGACTACATGCCTAACCGAAGCCTTGACCGTGTACTATTTCGCAGGCATGAGAACTTGAAGGCTGAGCCTCTTGGTTGGGGACAAAGAGGGAAAATTGTTAAAGGTTTGGCAGCTGCATTGTACTATCTCCATGAACAACTAGAAACTCAAATCATTCATAGGGATGTTAAAACCAGCAATGTGATGCTTGATTCTCATTACAATGCTCGCTTGGGTGATTTTGGCATGGCTAGGTGGCTAGAACATGAGCTTGAGTACAAGTATATCAATAGTAAAAAAACTTCAACAAAAGTTGACCATTTCAGGTTGGGAGAGACATCAAGAATTGGTGGCACAATTGGGTATCTTCCACCTGAAAGCTTGCAGAAGCCAAGCAATGCTACCTCCAAATCTGATGTCTTCAGCTTTGGGATAGTTGTGCTAGAGGTGGTGTCTGGAAGAAGAGCAATAGATCTCACATACCCGGATGAACAAATCATTTTGCTTGACTGGATCAGAAGGCTTTCTGATGAAGGGAAACTTCTGGAAGCAGCTGATACTCGGTTACCAGATGGTTCCTACAAGCTTTCACAGATGCAACATTTCATTCACATAGGCCTCCTCTGCACACTCCATGACCCACAATTGAGGCCAAACATGAAATGGGTTGTGGAAGCACTTTCTGACATTGCTTTCCATTTGCCAGCACTCCCTTCATTTCTCTCCCACCCTTTATATATATCTCTCTCTTCCCCATCAGGGACTAGTCATAGTCCTAGTAGCACAAGTGGCACCAGCTCTACCACAGAGAATGCTAGCATAATCACCAACTATACTTCATCAAACTATGTCACAGCCGCAGGTGAAACTGTGTATGTAACTGCTGAACACAAAAACAGTGAAATCATCTCTTCTAAGAGCATGAATCACCACCAATCGTTTCCCATGGTTGAAACTCCAAGAGAAATATCATACAAGGAGATTATTTCTGCTACAGATAACTTTTCAGATTCAAGAAGGGTTGCTGAGCTAGATTTTGGAACTGCTTATCATGGCATACTTGATGACAGTTGCCATGTCTTGGTGAAACGCCTGGGGATGAAGACGTGTCCCGCATTGCGCGACAGATTCTCGAATGAACTGCGGAATCTAGGAAAGCTTCGCCATAGGAATTTGGTGCAGCTTCGTGGGTGGTGCACTGAGCAAGGAGAGATGCTAGTTATTTATGATTACTCAGCAAGCAGAATTCTCAGTCAACAGCTTCTGCATCATAGCAGTGGAAGTAGAACTGGGTGTTCTGTCCTCCAATGGCACCACAGGTACAACATAGTAAAAGGACTGGCCTCTGCAGTCCTCTATCTACATGAGGAATGGGATGAGCAAGTGATTCACAGAAACATTACCTCTTCAGCTGTCATCCTTGAACCAGATATGAACCCAAGACTAAGCAGTTTTGCTCTAGCTGAATTTTTGTCAAGAAATGAGCATGGCCATCATGTAATCATTGACACTAGAAAATCAGTTCGTGGGATATTCGGCTACATTTCACCAGAATATGTGGAATCTGGTGAAGCTACCTCAGCAGCTGATGTTTATAGTTTTGGTGTGGTGGTGCTTGAAGTTGTCACTGGACAGATGGCAGTGGACTTCAGGCAGCCAGAGGTGCTTTTGGTGAAGAAGGTTCATGAATTTGAGATGAGAAAAAGACCATTGAAGGAATTAGCTGACATAAGACTTAATGGAGAGTTCAATGACAAAGAACTGATGAGATTGGTAAGGTTAGGAATTGCATGCACCCGTTGCAACCCACAGTTAAGACCAACCATGAGACAAATAGTAAGCATCCTTGGTGGCAATGACAAATTACTCATGCAGAATAACACGGAAAGCATGGAAGAATGGAGACAAAGAAATGCTAGTTCTTTGGAAATGATTAAGAGAATCCAAGCTCTAGGAATACAGTAA 2520 0.4306 MQLNRLCIVLPPKSGEMMQPFEKGVQQQPFQTAKKQDKAKQPQRACGGQVLDLLRDSLIKFYDSGWWRICQRGEHKENKNSGLLFHDMDGVQVSVNIGSDNPRIFSYAELFIGSNGFCEDQVLGSGGFGKVYKAVLPSDGTVVAVKCCLEEKGKQFEKSFAAELTAVADLRHKNLVRLRGWCVHEDQLHLVYDYMPNRSLDRVLFRRHENLKAEPLGWGQRGKIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGMARWLEHELEYKYINSKKTSTKVDHFRLGETSRIGGTIGYLPPESLQKPSNATSKSDVFSFGIVVLEVVSGRRAIDLTYPDEQIILLDWIRRLSDEGKLLEAADTRLPDGSYKLSQMQHFIHIGLLCTLHDPQLRPNMKWVVEALSDIAFHLPALPSFLSHPLYISLSSPSGTSHSPSSTSGTSSTTENASIITNYTSSNYVTAAGETVYVTAEHKNSEIISSKSMNHHQSFPMVETPREISYKEIISATDNFSDSRRVAELDFGTAYHGILDDSCHVLVKRLGMKTCPALRDRFSNELRNLGKLRHRNLVQLRGWCTEQGEMLVIYDYSASRILSQQLLHHSSGSRTGCSVLQWHHRYNIVKGLASAVLYLHEEWDEQVIHRNITSSAVILEPDMNPRLSSFALAEFLSRNEHGHHVIIDTRKSVRGIFGYISPEYVESGEATSAADVYSFGVVVLEVVTGQMAVDFRQPEVLLVKKVHEFEMRKRPLKELADIRLNGEFNDKELMRLVRLGIACTRCNPQLRPTMRQIVSILGGNDKLLMQNNTESMEEWRQRNASSLEMIKRIQALGIQ* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0063 839 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Apr10g0063 839 ProSiteProfiles Protein kinase domain profile. 117 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0063 839 ProSiteProfiles Protein kinase domain profile. 520 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0063 839 SMART serkin_6 117 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0063 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Apr10g0063 839 Gene3D Transferase(Phosphotransferase) domain 1 195 417 - -
Apr10g0063 839 SUPERFAMILY Protein kinase-like (PK-like) 100 450 IPR011009 -
Apr10g0063 839 Pfam Protein tyrosine and serine/threonine kinase 526 801 IPR001245 GO:0004672|GO:0006468
Apr10g0063 839 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 1 838 - -
Apr10g0063 839 Gene3D Phosphorylase Kinase; domain 1 89 194 - -
Apr10g0063 839 Gene3D Phosphorylase Kinase; domain 1 479 596 - -
Apr10g0063 839 Gene3D Transferase(Phosphotransferase) domain 1 603 827 - -
Apr10g0063 839 SUPERFAMILY Protein kinase-like (PK-like) 492 801 IPR011009 -
Apr10g0063 839 Pfam Protein kinase domain 119 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0063 839 CDD STKc_IRAK 531 801 - -
Apr10g0063 839 PANTHER - 1 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0063 Apr-Chr10 1471567 1475587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0063 505 803 Receptor kinase-like Gene Family AT3G59740 33.003 5.41e-44 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr10g0063 PK_Tyr_Ser-Thr 2.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0063 - - gmx:100796108 1461.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1446 10 26836727 26840102 Apr10g0063 10 1471567 1475587 PCT