Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0061 ATGTCCTTCAATCAATCAAAGTCCGATAAGAACGACGCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAACCAGCAGCGAGGTTCCTCCGGCGGTGCGTACGGCAAGGGCGGCGCCGGCGCCGCTCCTTCTCCGTCACTCTCCTCTAGCCGGAGTTTTAACAAGAAGTCTAATAATAATGCACAAGGTGGGCAATCTAGGTTAAACCCTACACCGGTGAATACAGCCGAGTCTAATAGTACTTATGCAGCCCGGACTGTGCCAAATGGTACCCATTTGCAGCAGCAAATTCATGGCGGATCTGATGTGGCAGTTACAAATACAACTGGCAAGCCATCTGAATCGTCCACTGCACAGAGGGGCACCAGAGTTGTTCCAAAAGCTCCTACTTCTCAACCTCCCACCGTGAGTTCTGATCCAGCAGCTCCTGCAACCCCTGTCAAGGAAGATGCTTCCAAGGCATTCCCTTTCCAATTTGGATCCATTAGTCCAGGCTTTATGAATGGGATGGCAATTCCTGCTCGCACAAGTTCAGCTCCTCCCAATATAGATGAGCAGAAGCGTGATCAAGCTCGTCATGATTCTTTTAGACCTGCACCTTCAGTGCCAATGCCTCCTGTTCCAAAGCATCAGCCAGCAAAGAAGGATACAAGTGTTGCTGTCCAATCTAATACTGGGGAGACTTATATGGGTACTAGGGCAAAAAAAGATACTCATGTGTCACCTTTACCCCCAGCAAGCCAGATGCAGAAGCCTTCTGTCATTCCTTTAACTGGAATTTCAATGCCAATGCCTTATCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCTAATCCACAGATTCAATCTCAGGGTATGTCAACGGCATCTCTTCAGATGCCGTTACCAATGCCTTTACCAATTGGAAGTGCTGGACAAGTGCAACAGCAGGTTTTTGTTCCAAGCCTTCAACCTCATCCTATCCATCCTCAGGGAATCATGCATCAAGGCCAAAACATAGGTTTCACTCCTCAAATGGGCCCACAATTGCCTCATCAGTTAGGCGGCATGGGTATTGGCATCGGCCCACAATATCCCGCACAGCAAGGAGGAAAATTTGGTGGTCCTCGCAAAACTACTCCTGTCAAGATAACTCATCCTGAGACACATGAAGAGCTTAGACTTGATAAAAGGGTAGATGCATATACAGATGGTGGAGCATCTGGCGCAAGGTCTCATTCTGGCATGCCTTCTCAATCTCAGCCTGCCCAGCCATTTGCAACTTCTCATCCTATTAATTACTATCCATCAAGTTCCTACAGTACCAATTCTCTCTTTTATGTGCCTCCTAGTTCTCTTCCATTAACAACTAGCCAGATAACTCCTAACTCTCAGCCACCAAGATTTAATTATGCAGTGAGCCATGGTCCCCAAAATGTTGGTTTTGTGAATTCTTCACCTCACAGTTCCCTGCCTGTTAATAGAGCTGGCACTTCTATTCCTGGCAATGCTGAACCACCTAATCCTGAATTTTCCCGTGATGTGCATAATGCAATCTCATCAGCTTCGTCAGGAGTAACTTCTGTGTCTATTAAGCCAAGTGGTGGATCTGGTGTTGTGGACTCATCATTTGCCAATTCCAGTGTATCTGGTACTCAAAAGAGGTCTGAAACATCTGAAATCTCTTCACAACAGCTGAAGTTGTCCAGTGATTCTTCAGTTTTGAGCTCATTGCCAAATCTATCTGCTGCATCTGCTGTGAAGTCTACATCAGCTTCTTTGTTGAGTGAAGACTCTGTTTCAGGTGTGCCTAATAATGAAAGCAGGAAGCAGGAATCTCTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAATGTACAGAAGAAAGGCCAATTACAGCCTCAGGTTTCTGTACAATCTCCTGCTGTGGCTAATGTGGCTTCCCAGGTTGTTGATGGTGGTAATGCTGATGAAGTTTCTGAAACTGTAGGAACTACAGCAAACCATTCTGCCTCAATTATCAGTGAAGATCACTCAGCAGTAGCTTCAGACAAATTTTCAACTACCACTGAAGGACCTGTTACTCAAGTGGTGGATAATTTGATCAATCATAAGAATGACAAGCAAAATGAATTGTCACAACAGGATAAACTGCCAAATCAGACCATTTTGGAAATGGGTGGTAATACAGAAATTTCATCTCTTCAAGGATGTAAACAGGATATCAGTGGTGGGGCAGAATTAAAACAACCTGAGCAAGGTGATGAGAAATTAAGCACTGAGGTTGTAACCTCGAGGACTGAGCAGCTAGGGCAGGATGAATCTACAATTTGTAGTGCAGAATGTGACAGGATGGCTGATAATTTAGACATGTCTACCTCTACTTCATTGGATTCTAAAGATGTCTCTCTAAATAGAAATGATAGTGTAGTTAGTAATGAAGCTGTTTCTACAAATTCTGGCACATCAGATCAGCTGTCTGCTGATCTTCCAGAAACCAATTTAAAACTCTGCAAGGATAGTTCAGAGAGTGCTAGCAGTGGTTCAGTGTCTCTTCCAGCATCAGGTACCAAGGATAGACTGATTTCAGAGCCTAGTAAGGCGAAAACTACAAAGGGGAAAAAGAAACGAAAAGAGATTCTTCAGAAGGCAGATGCTGCTGGGTCAACATCTGATCTGTATAACGCATATAAGGGACCTGAGGAAAAGAAAGAAAATGTTGTAAGTTCAGAGAAAACAGAAAGTGCTTCTACTTCTGGCAATTTAGAGCTGTTGCCTACTGATGCTTCTCAGCCAGAAACTGTAGCAGGTGAGCAATGTAAGCAGAGTAAAGCTGAAATTGATGATTGGGAGGATGCAGCTGACATGTCTACACCAAAACTAGAAGTTACAGATAAAACTGAAGAGGTTAGTGATGGAAGTGCAGTAACTGCAAAAAAGTACTCTCGAGATTTCCTTTTAAAATTTGTAGAGCAATGCACTGATCTTCCCGAAGGTTTTGAAATCACGGCAGACATAGCTGAGGCTTTGATGGGTTCTAATGTTAGTTCTCATGTAATTGAACGTGATTCACATTCTTCTGGAAGAATTATAGATAGGTCAGGAGGGATGTCTCGTATGGATCGTCGTGGGAATGGTGTTATTGAGGAAGATAAATGGACTAGAGTTTCTAATGCATTTCATTCTGGTATGCGTTTGGATGGTATTGGAGGTAATGCAGGATTTCGACCTGGTCAAGGTGGCAATTTTGGTGTTTTAAGGAATCCACGCGCACAGGCACCTATGCAATATGCTGGAGGGATTCTTTCTGGACCAATGCAATCCATGGTAAACCAGGGAGGAATGCAAAGAAATAGCCCTGATGGAGAAAGATGGCAGCGTACTGCTAACATCCAGCAGAGGGGTCTAATTCCATCTCCTTCCCCGCAAACTCCTTTACAGACAATGCACAGAGCTGAGAGGAAGTATGAGGTGGGTAAAGTGACAGATGAGGAAGAGGCAAAGCAGAGGCAGTTGAAAGCTATATTGAACAAGTTGACTCCTCAGAATTTTGAGAAGCTTTTTGAGCAGGTTAAAGCAGTTAATATTGACAATGTAGTCACTCTCAATGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAGCCTACTTTCTGTGAAATGTATGCCAATTTCTGTTTCCATCTGGCAGCTGCATTGCCTGATCTCAGCGAAGACAATGAAAAGATAACTTTTAAAAGATTATTACTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGCTGATGAGGGTGAGGTCAAGCTGTCTAATGAGGAAAGAGAAGAAAAACGAACCAAGGCAAGAAGACGTATGTTGGGTAATATCAGATTGATTGGAGAACTATATAAGAAGAAAATGCTGACAGAGAGGATAATGCATGAATGCATCAAGAAGTTACTGGGCCAGTTTCAAGATCATGATGAAGAGGATATTGAAGCCTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAGATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGTCATTGATTTGAGAAAGAATAAATGGCAACAAAGAAGAAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTTCTCAAGAGAGGCTGGCCCAAGCTGGTAGATTGGGTCGTGGTTCGGGTAACAATCCACCTAGAAGGATTCCTATGGATTTTGGTCCAAGAGGGTCATCTATGTTGTCTTCTCCTAATGCTCAGATGGGTGGATTGCGTGGGTTGCCTACTCAAGGTCGTGGGTATGGTTCACAGGATGTTCGCATGGATGATAGGCAAAGTTACGAGGCTAGGACATTGTCAGTTCCCTTGCCACAGAGACCCTTAGGCGATGAGTCAATAACCTTGGGACCCCAGGGTGGTCTTGCCAGAGGAATGTCCATTAGAGGTCCACTTGCAGTTCCAAGTTCAACTGCTCTTAATGGTTATGGTAATTTATCAGAGCGTACCCCATTCAGCTCTAGGGAGGATCATGCATCAAGATATACTCCAGATAGATTTGCCGGTTCAACTACTTATGATCAATCTAGTGTTCAAGACCGTAATATGAATTATGGAAACAGGGACATGAGAAATGCAGATAGGATTCTTGATAGACCTGTTGTAACTTCACCACCAGCCCGAGCTCAAGGGACAGCAGTCTCTCAGAATCCTTCTTCAGGGAAGGCTTTGACAGAAGAGCGACTGCATGAAATGTCCATGTCAGCAATCAGAGAATACTATAGTGCTAGAGATGTGAAAGAAGTTGTTTTATGCATCAAAGATCTGAACTCTCCAAGCTTTCATCCTTCCATGGTTTCTGTCTGGGTCACAGACTCATTTGAGAGAAAGGACACAGAGAGAGATCTTTTGGCCCAATTGCTTGTCAACCTTGTAAAATCTCAAGATGGCACCTTGAGTCAAGTCCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACATTGGAAGATGCGGTTAATGATGCCCCCAAAGCGCCAGAGTTTCTCGGCCGCATTTTTGCCAAAGCTATTACAGAGCATGTGATCTCTTTAAATGAGATTGGACGGTTAATACATGATGGTGGAGAGGAGCCGGGAAGCCTCTTAGAAGTTGGGCTTGCAGCTGATGTTCTTGGAAGCACCTTGGAGGTAATAAAAATGGAGAAGGGTGATACTGTTTTGAGTGATATCTGTGCAAACTCCAACTTGAAGTTGGAGACATTCCGGCCGCCGGATCCTCTTATTACATCAAGGAAGTTAGAGAAATTTATTTAG 5394 0.4381 MSFNQSKSDKNDAVYRKSGRSASFNQQRGSSGGAYGKGGAGAAPSPSLSSSRSFNKKSNNNAQGGQSRLNPTPVNTAESNSTYAARTVPNGTHLQQQIHGGSDVAVTNTTGKPSESSTAQRGTRVVPKAPTSQPPTVSSDPAAPATPVKEDASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKRDQARHDSFRPAPSVPMPPVPKHQPAKKDTSVAVQSNTGETYMGTRAKKDTHVSPLPPASQMQKPSVIPLTGISMPMPYHQSQASVHFGGPNPQIQSQGMSTASLQMPLPMPLPIGSAGQVQQQVFVPSLQPHPIHPQGIMHQGQNIGFTPQMGPQLPHQLGGMGIGIGPQYPAQQGGKFGGPRKTTPVKITHPETHEELRLDKRVDAYTDGGASGARSHSGMPSQSQPAQPFATSHPINYYPSSSYSTNSLFYVPPSSLPLTTSQITPNSQPPRFNYAVSHGPQNVGFVNSSPHSSLPVNRAGTSIPGNAEPPNPEFSRDVHNAISSASSGVTSVSIKPSGGSGVVDSSFANSSVSGTQKRSETSEISSQQLKLSSDSSVLSSLPNLSAASAVKSTSASLLSEDSVSGVPNNESRKQESLSRSNSLKDNQKNVQKKGQLQPQVSVQSPAVANVASQVVDGGNADEVSETVGTTANHSASIISEDHSAVASDKFSTTTEGPVTQVVDNLINHKNDKQNELSQQDKLPNQTILEMGGNTEISSLQGCKQDISGGAELKQPEQGDEKLSTEVVTSRTEQLGQDESTICSAECDRMADNLDMSTSTSLDSKDVSLNRNDSVVSNEAVSTNSGTSDQLSADLPETNLKLCKDSSESASSGSVSLPASGTKDRLISEPSKAKTTKGKKKRKEILQKADAAGSTSDLYNAYKGPEEKKENVVSSEKTESASTSGNLELLPTDASQPETVAGEQCKQSKAEIDDWEDAADMSTPKLEVTDKTEEVSDGSAVTAKKYSRDFLLKFVEQCTDLPEGFEITADIAEALMGSNVSSHVIERDSHSSGRIIDRSGGMSRMDRRGNGVIEEDKWTRVSNAFHSGMRLDGIGGNAGFRPGQGGNFGVLRNPRAQAPMQYAGGILSGPMQSMVNQGGMQRNSPDGERWQRTANIQQRGLIPSPSPQTPLQTMHRAERKYEVGKVTDEEEAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNVVTLNGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSNEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQFQDHDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMRLLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERLAQAGRLGRGSGNNPPRRIPMDFGPRGSSMLSSPNAQMGGLRGLPTQGRGYGSQDVRMDDRQSYEARTLSVPLPQRPLGDESITLGPQGGLARGMSIRGPLAVPSSTALNGYGNLSERTPFSSREDHASRYTPDRFAGSTTYDQSSVQDRNMNYGNRDMRNADRILDRPVVTSPPARAQGTAVSQNPSSGKALTEERLHEMSMSAIREYYSARDVKEVVLCIKDLNSPSFHPSMVSVWVTDSFERKDTERDLLAQLLVNLVKSQDGTLSQVQLIKGFESVLSTLEDAVNDAPKAPEFLGRIFAKAITEHVISLNEIGRLIHDGGEEPGSLLEVGLAADVLGSTLEVIKMEKGDTVLSDICANSNLKLETFRPPDPLITSRKLEKFI* 1798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0061 1797 MobiDBLite consensus disorder prediction 44 139 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 836 933 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 585 634 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 1584 1603 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 1257 1285 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 475 492 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 509 562 - -
Apr10g0061 1797 ProSiteProfiles MI domain profile. 1608 1732 IPR003891 -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 907 933 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 475 562 - -
Apr10g0061 1797 SMART if4_15 1165 1387 IPR003890 GO:0003723|GO:0005515
Apr10g0061 1797 MobiDBLite consensus disorder prediction 1588 1603 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 741 771 - -
Apr10g0061 1797 SMART ma3_7 1609 1723 IPR003891 -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 1414 1475 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 1545 1566 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 173 221 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 18 32 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 1 148 - -
Apr10g0061 1797 Pfam MA3 domain 1615 1722 IPR003891 -
Apr10g0061 1797 SUPERFAMILY ARM repeat 1159 1389 IPR016024 -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 1517 1568 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 836 852 - -
Apr10g0061 1797 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 122 1786 - -
Apr10g0061 1797 SUPERFAMILY ARM repeat 1602 1788 IPR016024 -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 407 424 - -
Apr10g0061 1797 Gene3D - 1600 1797 - -
Apr10g0061 1797 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 122 1786 IPR045208 GO:0003743
Apr10g0061 1797 Pfam MIF4G domain 1165 1387 IPR003890 GO:0003723|GO:0005515
Apr10g0061 1797 Gene3D - 1165 1400 - -
Apr10g0061 1797 Coils Coil 1247 1267 - -
Apr10g0061 1797 MobiDBLite consensus disorder prediction 397 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0061 Apr-Chr10 1419633 1428969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0061 1 1796 Eukaryotic Initiation Factors Gene Family AT3G60240 46.857 0.0 1344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0061 K03260 - gmx:100796636 2783.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0445 10 11115987 11126327 Apr10g0061 10 1419633 1428969 PCT