Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0059 ATGCATCAAAAGAAATCAGAGGTTCAGATCGGAAAAGAAAGCATAGGCGTCTCTTCCGATTTCAATCCAACACCGCCACTTCAATACCAATCATCAATTCACCAAAAGAACGCACATCATCGCCACCAATTCTATCCCCAAATAGAAATAGACATATCCCCGCCCCAACCGCACCAACATCAGAAACAACGAACCCAAAAGCAACACCAACCGCCACTCTTCAAGTCCCACAACGCCGCCTTCTTCTCCGTCACCGTCGCCGCAAAAAGCGCTGCCTTCCGCGCTCTACGGCGCCTGAAGCGACAACGCGCGCTCTTGTTGCTGTCTCTTCCGTTCCTCTATTTCTACTTCCTCGTCTCTCGATCGTTCCTCTTAGACCTTCTCTCCGCGGTGGCTTTCTCCGCCGCGCTTCTCTTTTCTCTGAACCTCGCGCTTCCCTTGCCGCTGCCTTCAATTCGGCTCAAACCTCGCTCCGCCGTGGTCGGACGGCCGTCGGCGCCGCTGCCGGTGTTTTGGACGATCGGTTCGCGGCCGAAGTCGGAGAAGCGCGTGGCGTCGGGGTGCTGGGTTCAAGTTTTTGGAAACGGCGACGTTTACGAGGGGGAGTTTCACAGAGGGAAGTGTTCAGGGAGTGGGGTTTACTACTATAGCAGGAGTGGGAGGTATGAGGGGGATTGGGTTGATGGCAAGTATGATGGATTTGGGGTTGAGACATGGGCCCGTGGCAGTCGTTACCGCGGGCATTACCGGCTCGGGTTGAGGCATGGTTTTGGGGTGTATAGGTTTTACACTGGCGATGTTTATGCTGGAGAATGGTCCAATGGGCAGAGTCATGGGTGCGGTGTTCACACTTGTGAGGATGGGAGTAGGTATGTTGGGGAGTTCAAATGGGGTGTTAAGCATGGCCTTGGTCATTATCATTTCAGAAATGGAGATACATATGCGGGTGAATACTTCGCAGACAAGATGCATGGTTTTGGGGTATATCATTTTGCAAATGGCCATCGTTATGAAGGAGCTTGGCATGAAGGAAGAAGGCAAGGTCTTGGAATGTATACATTTAGAAATGGTGAAACCCAATCTGGTCACTGGCAAAATGGAGTCCTTGACATTCCAAGCACACAAAACACATCTTATCCAGTTTCTCCTGTTGGTGTCTCTCATTCCAAAGTACTTAATGCGGTGCAGGAAGCAAGACGAGCAGCAGAGAAAGCCTATGATGTGGCCAAGGTAGATGAAAGGGTGAACAGAGCAGTGGCAGCTGCTAATAGAGCAGCCAATGCAGCTAGAGTAGCTGCTGTCAAGGCTGTGCAAAAGCAAATGCATCATGTTAACAATGAAAGCTTCTCAATTCCCGTTGTGTAA 1365 0.5084 MHQKKSEVQIGKESIGVSSDFNPTPPLQYQSSIHQKNAHHRHQFYPQIEIDISPPQPHQHQKQRTQKQHQPPLFKSHNAAFFSVTVAAKSAAFRALRRLKRQRALLLLSLPFLYFYFLVSRSFLLDLLSAVAFSAALLFSLNLALPLPLPSIRLKPRSAVVGRPSAPLPVFWTIGSRPKSEKRVASGCWVQVFGNGDVYEGEFHRGKCSGSGVYYYSRSGRYEGDWVDGKYDGFGVETWARGSRYRGHYRLGLRHGFGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGVYHFANGHRYEGAWHEGRRQGLGMYTFRNGETQSGHWQNGVLDIPSTQNTSYPVSPVGVSHSKVLNAVQEARRAAEKAYDVAKVDERVNRAVAAANRAANAARVAAVKAVQKQMHHVNNESFSIPVV* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0059 454 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 62 445 - -
Apr10g0059 454 MobiDBLite consensus disorder prediction 54 70 - -
Apr10g0059 454 Gene3D - 274 319 - -
Apr10g0059 454 Gene3D - 320 384 - -
Apr10g0059 454 Gene3D - 181 228 - -
Apr10g0059 454 Gene3D - 229 273 - -
Apr10g0059 454 SMART morn 312 333 IPR003409 -
Apr10g0059 454 SMART morn 243 264 IPR003409 -
Apr10g0059 454 SMART morn 220 241 IPR003409 -
Apr10g0059 454 SMART morn 266 287 IPR003409 -
Apr10g0059 454 SMART morn 289 310 IPR003409 -
Apr10g0059 454 SMART morn 197 218 IPR003409 -
Apr10g0059 454 SMART morn 335 356 IPR003409 -
Apr10g0059 454 MobiDBLite consensus disorder prediction 51 70 - -
Apr10g0059 454 Pfam MORN repeat 314 336 IPR003409 -
Apr10g0059 454 Pfam MORN repeat 337 358 IPR003409 -
Apr10g0059 454 Pfam MORN repeat 199 217 IPR003409 -
Apr10g0059 454 Pfam MORN repeat 245 267 IPR003409 -
Apr10g0059 454 Pfam MORN repeat 291 313 IPR003409 -
Apr10g0059 454 Pfam MORN repeat 222 244 IPR003409 -
Apr10g0059 454 Pfam MORN repeat 268 290 IPR003409 -
Apr10g0059 454 PANTHER - 62 445 - -
Apr10g0059 454 MobiDBLite consensus disorder prediction 1 22 - -
Apr10g0059 454 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 239 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0059 Apr-Chr10 1390767 1400316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0059 191 370 Acyl Lipid Metabolism Gene Families AT1G60890 37.222 1.72e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0059 - - gmx:102667330 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0059 10 1390767 1400316 Apr10g0876 10 21237445 21242026 PCT
Apr10g0457 10 11340449 11344644 Apr10g0059 10 1390767 1400316 PCT