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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Apr10g0055
ATGATCCCAATTTCATTTGTGGAGAAACATGGAGAAGCCTTGCCAAGTACTATATTTCTTAAGCCTCCAAATGGTACGGAATGGAAATTAAATTTGGTAAAACGTGATGATAAAATATGGTTTCAGAAGGGATGGAAAGAATTTGCGGAGTATCACTCTCTAGGCCACGGGCATCTCTTGGTCTTCAGATATGAAAGAACTTCCCATTTTCAGGTACAAATCTTTGATATGAGTGCCTTAGAGATAAACTACCCATTCGAAAGTGTAAATGGTAAAATGGCCTCCAATGATCAAGAAAGCAACCCTCCAAATAATGAAAGCATGGAACATTACAAACTAAGTCAAAAGAGGAAAGATAACTCCCCTTTGGAATTTCTTCAACCAAGTAGAAAGAGAACCTGCAAATGTGTTGAAGTTGAGAACATCTTGAAATTGCCAGATACGGTTCTTCATCATACCGACACAAAGTGCGAAGAAAAAGAAGTGATTAGTAATAAGAAAATTACAGTTCCTGATAGAGCAAGTTCTTTTAAGCCTTGTAATCCGTCGTTCTCGATGGTTATGTATCCATCGTACGTGTCTGGTGGTAATATGTGTTTACCATCAAAGTTTTGTAAGATGCACTTTGATGTGCACCAGCAGTATGGAGACACAGATCTTCAGGTGTTGAATGGGAGAGTTTGGCCTGTTAAGTACCAAAAAAGGAAAGCACAAACGAGATTTCATTTCTCCAGGGGATGGAAGACATTTGTCAAAGACAATAACTTGCAAGTAGGTGATGTTTGCACTTTTGAACTCCTTCCTAGGACTAAACTCACCTTCCAGGTTCACATCTTTAGAGAGACAGACAAATCATTTCAAACTGTTCCACATCTGAAGGTAGGATTGATGTTTTAA
897
0.3846
MIPISFVEKHGEALPSTIFLKPPNGTEWKLNLVKRDDKIWFQKGWKEFAEYHSLGHGHLLVFRYERTSHFQVQIFDMSALEINYPFESVNGKMASNDQESNPPNNESMEHYKLSQKRKDNSPLEFLQPSRKRTCKCVEVENILKLPDTVLHHTDTKCEEKEVISNKKITVPDRASSFKPCNPSFSMVMYPSYVSGGNMCLPSKFCKMHFDVHQQYGDTDLQVLNGRVWPVKYQKRKAQTRFHFSRGWKTFVKDNNLQVGDVCTFELLPRTKLTFQVHIFRETDKSFQTVPHLKVGLMF*
299
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Apr10g0055
298
MobiDBLite
consensus disorder prediction
91
109
-
-
Apr10g0055
298
MobiDBLite
consensus disorder prediction
91
119
-
-
Apr10g0055
298
Gene3D
-
162
284
IPR015300
-
Apr10g0055
298
PANTHER
B3 DOMAIN-CONTAINING
1
281
-
-
Apr10g0055
298
Pfam
B3 DNA binding domain
185
281
IPR003340
GO:0003677
Apr10g0055
298
Pfam
B3 DNA binding domain
2
76
IPR003340
GO:0003677
Apr10g0055
298
Gene3D
-
1
79
IPR015300
-
Apr10g0055
298
PANTHER
TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED
1
281
-
-
Apr10g0055
298
CDD
B3_DNA
182
280
IPR003340
GO:0003677
Apr10g0055
298
ProSiteProfiles
B3 DNA-binding domain profile.
1
78
IPR003340
GO:0003677
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Apr10g0055
Apr-Chr10
1303707
1304889
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Apr10g0055
2
283
B3 DNA Binding Superfamily
AT3G18990
30.650
1.66e-35
129
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3
Apr10g0055
B3
3.5e-23
CL0405
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Apr10g0055
-
-
gmx:100819782
340.117
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