Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0049 ATGGCAGATAGTGTGGTTGCCTTCCTCTTAGATCACTTGTCCCAGCTTCTAGCACACGAAGCTAAGTTACTCTCTGGCGTGGAGGACAGAATCAGATCCCTCCACAACGAACTCGAAATGATAAACGAGATCCTCAAAACCTTCGGGAGGAAGAAGCACAAGAGCGAGATAGAGCAAACAGTTGTGAACCAAATTAGAGACGTTGCCTACGAAGCTGAAGACGTTGTGGACACGTTCATCGCCAACGTGGCCGCACACAAGAAGAGAAGCATCCTGGAGAGAACGCTTCACGTCGTGAACCATGCCAAGTTGCTTCGGCACTTGGCCGAGAAAATAGACAAGACAAAAGCCACTATCAATGAAATTTGCCAGAACAGAATTAAGTACCTCCAGTTCCAAGAAGGTGAAGAATATGACAGAGAAGACGAGGAGAGGGTGCAATCACTCCACGAGCGAAGAAGAAACGTGGAGGAAAACGAGGTCGTGGGGTTTTTCCGTGACTCCAAGCAACTCATCACGCGGCTCGTGGAAGGGGGTTCGGCGCGTGGCGTGGTCTCAATCATTGGCATGGGTGGATTAGGAAAAACCACCCTTGCACGGAAGGTGTACAACAGCAACGAAGTGAAACAACACTTCGACGTTCGCGCGTGGGTTTATGCATCTAATGATTGCAGAGCTAGGGAACTTATGCTTGGCCTTCTGAAGCATTTGATGCAGAGCCATAAACCTCGCGATAGCTTGAGCAAGGATGAAGCAAAAGAAATGCGATGGAAAAGCAAGAAGCATAAGGAAATAATAGATAAACTCGAGGTTGCAGACATTTCTAGCTTGAGCAAAGACGAAATGAAGGGAATGCTGAGGGAATACTTAAAGAAGAAGAGATATTTACTGGTACTGGATGACTTGTGGAAAACCCAAGACTGGGACGAGGTAAAAGATGCTTTTCCAAATGACACCAGAGGTAGCAGAATATTGATTACAAGTCGTTTGAAAGAGGTGGCCTCGCATACCAGCCGAGACCCTCCTTATCTCCTTCCATTTCTCAATGAAGAAGAAAGTTGGGAGCTTTTCTCCAAGAAAGTGTTCAGGGGAGAAGAATATCCTGTTGACCTAGTTCCTCTGGGCAAAAAATTAGTTGAAAGTTGTCGCGGTTTGCCACTCTCTATTGTGGTACTGGCAGGGCTTCTAGCAAATAAGGAAAAGTCACAAAGAGAATGGTCCAAAGTGGTGGGTCATGTCAACTGGTATCTTACTCGAGATGAGACTCGCGTCAAGGATATACTCAAACTCAGCTACGACAACCTCCCTAAAAGGTTGAAGCCGTGCTTTGTGTACTTTGGGATATTCCTTGAAGACTCTGAAATTCCTGTAAGGCCTTTGTTGGAACGATGGGTTGCTGAAGGGTTTATTCAAGAATCGGGGAGTAGGGATCCTGAGGATGTTGCTGAAGACTACTTGTACGAACTCATTGATCGTAGTTTGGTTCAGGTGGCACGATTGAAAGTCAGTGGAGGTGTGAAAAAGTGTCGCATCCACGATCTTCTTCGGGACCTCTGCATATCCGAGAGCGAAAAGGACAAGGTTTTTGAAGTTTGCATGGATACTAACGTTCTAACTCCGACAAAACCCCGTAGGTTGTCCATCCATTGTAGCATAAACCACTATATTTCTTCAAACAACAACAACCACTCGTGTGTTCGTTCTTTGTTCTACTTGGACAACCTATCCTACAAGTTTTCTCGTAGCGAGTGGGAATGGCTCTTCAAAGGCTTCAAATTGGTTCGGGTGTTAGATCTTGGGAGGAACCTCTGCAATACTATCCCTTCCAACGTAGGGGGTTTCATCCACCTAAGGTTTCCAACACTTGAGGTGTTTCAGATGAAAAAATTGGCTGTTCGAAAATGGACATTGGGCAAAGGTTCAATGCCACGCCTTCAGAGTCTGCTCATCGACAAATGTCATTGGTTGGATGATCTCCCATCTGAAATATGGTTTTTGACATCCTTAAGAAAAGTGCAGATTCAGCAACCCTCACAAGGAATGGCTCGCATGCTAAGAATTGTTGAAGTGATGGATGGCTGTAAACTCGTAGTAGAGTGA 2100 0.4567 MADSVVAFLLDHLSQLLAHEAKLLSGVEDRIRSLHNELEMINEILKTFGRKKHKSEIEQTVVNQIRDVAYEAEDVVDTFIANVAAHKKRSILERTLHVVNHAKLLRHLAEKIDKTKATINEICQNRIKYLQFQEGEEYDREDEERVQSLHERRRNVEENEVVGFFRDSKQLITRLVEGGSARGVVSIIGMGGLGKTTLARKVYNSNEVKQHFDVRAWVYASNDCRARELMLGLLKHLMQSHKPRDSLSKDEAKEMRWKSKKHKEIIDKLEVADISSLSKDEMKGMLREYLKKKRYLLVLDDLWKTQDWDEVKDAFPNDTRGSRILITSRLKEVASHTSRDPPYLLPFLNEEESWELFSKKVFRGEEYPVDLVPLGKKLVESCRGLPLSIVVLAGLLANKEKSQREWSKVVGHVNWYLTRDETRVKDILKLSYDNLPKRLKPCFVYFGIFLEDSEIPVRPLLERWVAEGFIQESGSRDPEDVAEDYLYELIDRSLVQVARLKVSGGVKKCRIHDLLRDLCISESEKDKVFEVCMDTNVLTPTKPRRLSIHCSINHYISSNNNNHSCVRSLFYLDNLSYKFSRSEWEWLFKGFKLVRVLDLGRNLCNTIPSNVGGFIHLRFPTLEVFQMKKLAVRKWTLGKGSMPRLQSLLIDKCHWLDDLPSEIWFLTSLRKVQIQQPSQGMARMLRIVEVMDGCKLVVE* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0049 699 Gene3D - 5 120 - -
Apr10g0049 699 PRINTS Disease resistance protein signature 184 199 - -
Apr10g0049 699 PRINTS Disease resistance protein signature 382 396 - -
Apr10g0049 699 PRINTS Disease resistance protein signature 640 656 - -
Apr10g0049 699 Gene3D Ribonuclease Inhibitor 518 683 IPR032675 -
Apr10g0049 699 Gene3D - 144 340 IPR027417 -
Apr10g0049 699 Pfam NB-ARC domain 169 434 IPR002182 GO:0043531
Apr10g0049 699 Gene3D - 347 436 IPR042197 -
Apr10g0049 699 SUPERFAMILY L domain-like 510 674 - -
Apr10g0049 699 Pfam Rx N-terminal domain 5 89 IPR041118 -
Apr10g0049 699 PANTHER - 48 621 - -
Apr10g0049 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 445 IPR027417 -
Apr10g0049 699 PANTHER DISEASE RESISTANCE PROTEIN RP 48 621 IPR044974 GO:0006952
Apr10g0049 699 Gene3D - 437 517 IPR036388 -
Apr10g0049 699 CDD RX-CC_like 2 122 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0049 Apr-Chr10 999707 1002681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0049 185 518 WRKY Transcription Factor Family AT5G45050 24.779 8.93e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0049 - - gmx:100814688 800.431