Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0021 ATGGGAAATATTTCGCATAGAACCACACCTACGCAACCCTATAAAACCCTCTCCAAACAACAAAGCACAGCTGAAACGTACCCCGAGTCAACCAACACCGTTGGGGCTCTCTCGAGGTACCCAGTAACCTCCACCATGAACGGCGGCCACAGAGACGGCGATAGTAAGAATCTCCGCCGCAGTGAAACCTTGGACTTTCAAAACCTTAAGATTTTATCTGCCGTGGGACGCGGCGCCAAGGGCGTGGTGTTCTTGGCGAGGACGTATGGCGCGCGTAGCGGGAGATGGTTGGCGTTGAAAGTGGTGTCGAAGGCGTTGCTTCAGAAGAAGAACAAAAACAACGGCGAGTGCAAAAGGGTGTCGTTTGAGAGACACATACTGCGTCATTTCGATCACCCATTGTTGCCCAAGTTCCATGGGGCATTTGAAACAGAACAAATCACTGGGTTCGCTATTGATTTTTGCCACGGTGGAAATCTGCATTCTCTTAGGAAAAAGCAATCTGAGAAAACGTTCGCTGAAGAAACCATAAGGTTTTATGCAGTGGAATTGGTGCTGGCATTGGAGTATTTGCACAGTTTCGGAGTAGTGTACAGGGATTTGAAGCCAGAGAACATCATGATCCAAGAAACAGGTCACATAATGCTCGTGGATTTCGACCTCTCCAAGAAGTTAAACACAAAGTCCCCAAACTCACTGAGTTGCAACTCGTCACTCGTTTCTGACTCAGGATCAGAGAAAGAGCGAAGGAAGCGATGGTTCTCGCTGTTCAACTGTTATAGTCAATCATTCATACCCTCGGATGAGTTGGAGAATCAATCCGACCGGAACTCGGCGCATCGAAGCAGGGCAAACTCAGTGGAAAAGTCCAACTCGTTCGTGGGAACAGAGGATTACGTGGCACCGGAAGTTATATCTGGCGAAGGGCACAACTTCGGGGTTGATTGGTGGTCATTAGGCGTTGTTTTGTATGAAATGCTCTATGGTACGACGCCGTATAAGGGCGCAAATAGGAAAGAAACGTTTCACCGGATTTTAACCAAGAACCCTGATTTTACGGGTGAAACGACGCCGTTGAGGGACTTGATTCAGAAGCTGCTTAATAAAGATCCAGAATGTAGGATCGAAGTGGATGAAATCAAGGGTCACGATTTCTTCAAGGGTGTGCAATGGGACACGGTCTTGCAAATTGCGCGTCCACCGTATATTCCTCAGAACGACGTTGACGACACGACAGGGTTTTCAAAAAAAGATGTGGAGTCCTTTGTTCATGGAATATTTTTCCCAAAGACTAAAGGTGTCGAAGAGAAAAATAATGAAGCTGAGAAAACGAAGGATGGGGTGCAGAAAGACGACGATAATAATCACAAAGATAAGGATGCGTGGGTTGACAAGTTGAATCCGAATCGCACCACGGACGAAAAGTTTTTAGTTTTTTGA 1440 0.4681 MGNISHRTTPTQPYKTLSKQQSTAETYPESTNTVGALSRYPVTSTMNGGHRDGDSKNLRRSETLDFQNLKILSAVGRGAKGVVFLARTYGARSGRWLALKVVSKALLQKKNKNNGECKRVSFERHILRHFDHPLLPKFHGAFETEQITGFAIDFCHGGNLHSLRKKQSEKTFAEETIRFYAVELVLALEYLHSFGVVYRDLKPENIMIQETGHIMLVDFDLSKKLNTKSPNSLSCNSSLVSDSGSEKERRKRWFSLFNCYSQSFIPSDELENQSDRNSAHRSRANSVEKSNSFVGTEDYVAPEVISGEGHNFGVDWWSLGVVLYEMLYGTTPYKGANRKETFHRILTKNPDFTGETTPLRDLIQKLLNKDPECRIEVDEIKGHDFFKGVQWDTVLQIARPPYIPQNDVDDTTGFSKKDVESFVHGIFFPKTKGVEEKNNEAEKTKDGVQKDDDNNHKDKDAWVDKLNPNRTTDEKFLVF* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0021 479 ProSiteProfiles AGC-kinase C-terminal domain profile. 387 479 IPR000961 GO:0004674|GO:0005524|GO:0006468
Apr10g0021 479 MobiDBLite consensus disorder prediction 433 479 - -
Apr10g0021 479 ProSiteProfiles Protein kinase domain profile. 69 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0021 479 Pfam Protein kinase domain 285 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0021 479 Pfam Protein kinase domain 71 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0021 479 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 46 449 - -
Apr10g0021 479 Gene3D Phosphorylase Kinase; domain 1 69 158 - -
Apr10g0021 479 SMART serkin_6 69 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0021 479 Gene3D Transferase(Phosphotransferase) domain 1 286 405 - -
Apr10g0021 479 MobiDBLite consensus disorder prediction 1 31 - -
Apr10g0021 479 Gene3D Phosphorylase Kinase; domain 1 406 417 - -
Apr10g0021 479 PANTHER FLIPPASE KINASE 1-RELATED 46 449 - -
Apr10g0021 479 Gene3D Transferase(Phosphotransferase) domain 1 159 230 - -
Apr10g0021 479 SUPERFAMILY Protein kinase-like (PK-like) 67 411 IPR011009 -
Apr10g0021 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0021 Apr-Chr10 437620 439652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0021 52 479 AGC Kinase Gene Family AT3G25250 51.945 2.34e-142 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr10g0021 Pkinase 6.7e-33 CL0016