Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3685 ATGGCTGCAGAAGCTATTTTGTCTTCCGTTCTTAGTGTTGTTTTCGACAGGATGTCCTCCCCTGAAGTTGTTAACTGGATCAAAGGGAAGAAGCTTACTCAGAACCTGATTGAAAGGTTGAAGACTAATCTTTATGCTGTTCAAGCCTTTCTCGTCGATGCTGAGCAGAAGCAGACCAAGGAGAGACCTGTCAAGGACTGGCTTCATAGTCTCAAACATGCCATGTATGTTGCTGATGACTTGCTCGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCCTCTCTCGTTTCTCTGGTATTCTCAATTTGCAAGATCGGGATGTAGCAAACAGGATGGAGGAAGTCATTGATAGGATAGAGTCTCTTGTGATTCAAAAAGACACTCTTGGTCTCAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACTACATCTCTAGTTGAAACATCTGATGTATGTGGCAGGGAARAAGACAAGGAGGWCATAGTAAAACTCTTGTTGGATGATGATGGTGATGATACTGGTGGTCATAGTGATGTATCTGTGATTCCCATTGTKGGCATGGGTGGGATAGGAAAGACTACTTTGGCCCAATTGGTTTACCAGGATGGCAAAGTGAAGGAGAATTTTGATTTTCAAGCTTGGATTTGTGTGTCAGAAGAGTTTGATGTTTTCAAGGTCACCAAGACTATAATCGAGKCAATAACTTCAAGTTTTTGCAGCTTGACAGATTTGAATTTGCTTCAGCATGATTTAAAAGAAAAGTTGTCAAGGAAAAAGTTCTTTGTTGTCTTGGACGATGTATGGAGTGAAAGTTACGATGATTGGAATAAACTTCTAAAACCTTTTCGAAAAGGGGTTAAGGGAAGTAAAATTCTGATAACTACTAGAAGTAAAAGAGTGGCTTCTTTGGTGCAAACTGTTTCACCTTATGAATTAAGCTTATTGTCTGAGAAAGATTGTTGGTTAGTGTTTTCAAAACATGCACGTCTCTCAACTGTTTCTATGGAGAATCCGACCTTGAGAAAAGTCGGCAGAGATCTCGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGTTTATTGCGTGGAAATTCTGATATCAAGTATTGGAATCATTTATTGAAGAGTGAGATCTGGGAACACTCCGATGATAAGATAAAGGTTGTTCCTGCGTTAAGAATCAGTTATTACTATCTTCCTTCTTATTTAAAGGAGTGCTTTGTTTATTGTTCTTTGTATCCCAAAGACTATGAATTTAGCAAAGCTGAATTGATATTGCTATGGATGGCAGAGAATTTTTTGCAACCAGCAGGAAAAAAGACTCTAGAAGAAGTTGGTGATGAATATTTTGATGAATTGATTGCGAGATCATTTTTCCAACCTCATAAGATTTATAATAACAAGTTTGTGATGCATGATCTGGTGCATGATTTGGCAATGATATTTGCTGGAGAATTCTATTTCAGAGCTGAAGAGCTTGAGACTGCAGTTGAGGTTGATATTAAAACTCGCCATTTGTCACATAATGCCAAAGGCAATTATCCAATCTCAAAACTTTTGGGAGTTTGTGACCGAATGAAACACACAAGGTCATTTCTTGGACTCAATTTGAATTCAGATATTCCATTTAACATGGAAAATGCACCTTGTATCTTGTTGTCAAAGTTGAAGTACCTGAGGGCTTTGTCGTTCAACTGCTTTCCTCTTGAGTCATTGCCTGATTCAATAGGTGAGTTGATTCATTTGCGTTACTTGGATTTGTCTGACACCCGCATCATGACATTGCCCGATACACTTTGCAACTTGTACAATTTACAGACGTTGAAGCTGGTTGGATGTCGGAAACTAAAAGCCCTTCCTGTTGGCATGAAAGATCTTACAAATTTGCATTACCTTAATATTAGCGGGACTGATTTGCGTGAGATGCCGGAAGACATGAGCAAATTGACAAGTTTGCAGGTTTTAAGCAACTATGTTGTTGGGAAGCGTGAAGGGAACAGGATTAATGAATTGGGAGCACTTGCAAATCTACACCAAACAATTTTGATTGACAAATTGGAGAATGTGGTCAATAGCAGCGAAGCGTTGGGAGCAAGAATGTTTGATAAGGATGGCCTTGAATCTTTGTTCTTGAACTGGTCGCTAGATGAATATGAGAATACAGTTGATTCCCTAATTGAAAGAGATGTACTTGAAAAGTTACGACCTCATAGTAATTTGAAAAAACTACAAATTTGGGGTTACAGGGGTACAAAATTTCCAGATTGGTTCGGACGTTCTTCCTATGGCGACATCACCGAAGTAACTCTGGGAGGTTGCAGGAATTGTTTTATGCTTCCTTCACTTGGAGAGTTGCCCTCTTTGAAGCATCTAAAAATTTTTGAGTTTGAAAGGCTTGCTATTGTGGGTGCTGAGTTTTACCGAAATGATGAATCTTGTCTGGAGACTCCATTTCCAATGCTTGAAACTCTTAGATTTTACTCAATGCCTTGCTGGGAGGAATGGTTGGAGTTGAATGCATTTCCTCGACTTAGGGAGCTTATGATAAGGGATTGTCCCATGTTGAGAGGAGATTTGCCAAATCAACTACCATCTTTGGAAGATCTTACTATTCACAATTGCGAGCAGCTCAGTTGTTGTGTTCCAAGAGCTCCTGCGATTACCTCTTTAGGCATAGAAGGAAGCAATGAAGTGAGAATTGGGGAACTACCTCTTTTGCTGGATAAGCTTTCAATTAAAGGAAAGCATCAAGCGGAGTCGGTGATGGAGGCCATTGCGCACACCCAACTCACTTGCCTCCGAATTTTATCCATCTCAGGTTGTTCATCCCACGTATTGTTTGCAGTGAGTAGTATTCCCGCATCACTACAAAAGCTGAAGATAAAGAATTGCAAAAAATTAGAATTCCAAATGGAAGGCCTACACCACTCATTGCATAAACTAAGGATACAGAACAGCTGTGATTCGGTTACATCCTTCTCGCTGGATTCCTTTCCAAATCTCGTGCGTGTTCAAATCAGCGACTGTGAAAAGATGGAGTCTCTCGTGGTGTCACGCTCTCTTTCATGTCTCCGTTTTTTACTGATAAAGAATTGTGGGAGTTTGAAATCCCTCAAGACGCTATGGATGGCATCACCTCAGCTAGAAGATCTCAGATTACTTGGTTGCCCAGAGATTGATTTGTGTGCTAAAGGGGATCCACAGCGTAGCTTGAGATATCTTACCATCAGCTACTGCAAGAAACAACTCAGCTGTGTAGCATCGCAGTTTCATGGGCTTACTCATCTTTGTATTAAATATGAATATGAGAGTGTGAAGTCTTTCCCAAAGGAAGGTTGGTTGCCTGCCAGCCTTGAGTATCTCAGACTGGATAGCATTAAAAGTGTGGAGATGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAACAATTATATATTTATGAATGTTCCAATTTGGAGAACATTGATGGAGAAAAGCTGCCTGCCTCTCTGTTACGACTCACCATATTTGGAAGCCCTTTTCTGGGTAAACGGTGTGAGATGAAGGACCCGCAGGTTTGGCCCAAAATTTCCCACATCCCCGCCATTCAAGTTGATTACAGATGGATTTGTTACGATTTTGCTTTTGATGCATCCATAATATTCAATCATTCTAATACTCACAGGAATTCTGAGAAACAAGACAATGATAATAACTGCAACAGAGGAAGGTTCTTGAGGACATAA 3765 0.4061 MAAEAILSSVLSVVFDRMSSPEVVNWIKGKKLTQNLIERLKTNLYAVQAFLVDAEQKQTKERPVKDWLHSLKHAMYVADDLLDEVFTKAATQKDPGTFLSRFSGILNLQDRDVANRMEEVIDRIESLVIQKDTLGLREIPKENMSWRITTSLVETSDVCGREXDKEXIVKLLLDDDGDDTGGHSDVSVIPIVGMGGIGKTTLAQLVYQDGKVKENFDFQAWICVSEEFDVFKVTKTIIEXITSSFCSLTDLNLLQHDLKEKLSRKKFFVVLDDVWSESYDDWNKLLKPFRKGVKGSKILITTRSKRVASLVQTVSPYELSLLSEKDCWLVFSKHARLSTVSMENPTLRKVGRDLVKKCDGLPLAAQALGGLLRGNSDIKYWNHLLKSEIWEHSDDKIKVVPALRISYYYLPSYLKECFVYCSLYPKDYEFSKAELILLWMAENFLQPAGKKTLEEVGDEYFDELIARSFFQPHKIYNNKFVMHDLVHDLAMIFAGEFYFRAEELETAVEVDIKTRHLSHNAKGNYPISKLLGVCDRMKHTRSFLGLNLNSDIPFNMENAPCILLSKLKYLRALSFNCFPLESLPDSIGELIHLRYLDLSDTRIMTLPDTLCNLYNLQTLKLVGCRKLKALPVGMKDLTNLHYLNISGTDLREMPEDMSKLTSLQVLSNYVVGKREGNRINELGALANLHQTILIDKLENVVNSSEALGARMFDKDGLESLFLNWSLDEYENTVDSLIERDVLEKLRPHSNLKKLQIWGYRGTKFPDWFGRSSYGDITEVTLGGCRNCFMLPSLGELPSLKHLKIFEFERLAIVGAEFYRNDESCLETPFPMLETLRFYSMPCWEEWLELNAFPRLRELMIRDCPMLRGDLPNQLPSLEDLTIHNCEQLSCCVPRAPAITSLGIEGSNEVRIGELPLLLDKLSIKGKHQAESVMEAIAHTQLTCLRILSISGCSSHVLFAVSSIPASLQKLKIKNCKKLEFQMEGLHHSLHKLRIQNSCDSVTSFSLDSFPNLVRVQISDCEKMESLVVSRSLSCLRFLLIKNCGSLKSLKTLWMASPQLEDLRLLGCPEIDLCAKGDPQRSLRYLTISYCKKQLSCVASQFHGLTHLCIKYEYESVKSFPKEGWLPASLEYLRLDSIKSVEMLECKGLAHLTSLQQLYIYECSNLENIDGEKLPASLLRLTIFGSPFLGKRCEMKDPQVWPKISHIPAIQVDYRWICYDFAFDASIIFNHSNTHRNSEKQDNDNNCNRGRFLRT* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3685 1254 SMART LRR_typ_2 590 613 IPR003591 -
Amo20g3685 1254 SMART LRR_typ_2 637 660 IPR003591 -
Amo20g3685 1254 SMART LRR_typ_2 1046 1067 IPR003591 -
Amo20g3685 1254 SUPERFAMILY L domain-like 940 1203 - -
Amo20g3685 1254 Gene3D - 321 405 IPR042197 -
Amo20g3685 1254 Gene3D - 406 491 IPR036388 -
Amo20g3685 1254 Gene3D Ribonuclease Inhibitor 916 1210 IPR032675 -
Amo20g3685 1254 Gene3D Ribonuclease Inhibitor 530 915 IPR032675 -
Amo20g3685 1254 PRINTS Disease resistance protein signature 188 203 - -
Amo20g3685 1254 PRINTS Disease resistance protein signature 358 372 - -
Amo20g3685 1254 PRINTS Disease resistance protein signature 261 275 - -
Amo20g3685 1254 PRINTS Disease resistance protein signature 588 604 - -
Amo20g3685 1254 CDD RX-CC_like 37 127 IPR038005 -
Amo20g3685 1254 Gene3D - 145 315 IPR027417 -
Amo20g3685 1254 Gene3D - 24 144 - -
Amo20g3685 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 421 IPR027417 -
Amo20g3685 1254 PANTHER OS05G0414200 PROTEIN 28 981 - -
Amo20g3685 1254 PANTHER DISEASE RESISTANCE PROTEIN RP 28 981 IPR044974 GO:0006952
Amo20g3685 1254 SUPERFAMILY L domain-like 481 893 - -
Amo20g3685 1254 Pfam NB-ARC domain 184 387 IPR002182 GO:0043531
Amo20g3685 1254 Pfam Rx N-terminal domain 7 95 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3685 Amo-Chr20 147370253 147388576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3685 185 671 WRKY Transcription Factor Family AT5G45050 22.283 6.29e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3685 - - adu:107472405 1599.72