Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3651 ATGGCTGCAGAAGCTGTTTTGTCTTCCGTTCTTAGTGTTGTTTTTGACAGGATGTCCTCTCCTGAAGTTGTTAACTGGATCAAAGGGAAGAAACTTACTCAGAAGCTGATTGAAAGGTTGAAGACTAATCTTTATGCTGTTCAAGCCTTTCTCATCGATGCTGAGCAGAAGCAGATCAAGGAGAGACCTGTCAAGGACTGGCTTGATAGTCTCAAACATGCCATGTATGTTGCTGATGACTTGCTTGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCCTCTCTCGTTTTCTCAATTTGCAAGATAGGGATGTAGCAAACAGGATGGAGGAAGTCATTGATAGGATAGAGTCTCTTGTGATTCAAAAAGACACTCTTGGTCTCAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACTACATCTCTAGTTGAAACATCTGATGTATGTGGCAGGGAAGAAGACAAGGAGGCCATAGTAAAACTCTTGTTGGATGATAATGGTGATGATGATACTGGTGGTCATAGTGATGTATCTGTGATTCCCATTGTGGGCATGGGTGGGATAGGAAAGACTACTTTGGCCCAATTGGTTTATCAGGATGACAAAGTGAAGGAGAATTTTGATTTTCAAGCTTGGATTTGTGTGTCAGAAGAGTTTGATGTTTTCAAGGTTACGAAGACTATAATCGAGGCAATAACTTCAAGTTTTTGCAGCTTGACGGATTTGAATTTGCTTCAGCATGATTTAAAAGAAAAGTTGTCAAGGAAAAAGTTCTTTGTTGTCTTGGACGATGTATGGAGTGAAAGTTACGAAGATTGGGATAAACTTCTAAAACCTTTTCGAAATGGGGTCAAGGGAAGTAAAATTCTCATAACAACTAGAAGTAAAAGAGTGGCTTCTGTGGTGCAAACTGTTTCACCTTATGAACTGAGCTTATTGTCTGAGGAAGATTGTTGGTTGGTGTTTTCAAAACATGCACGTCTCTCAACTGGTTCTATGGAGAATCCAACCTTGAAAAAAGTTGGCAGAGATCTTGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAATCCCTTGGAGGCTTATTGCGTGGAAATTCTGATATCAAGTATTGGAATCATTTATTGAAGAGTGAGATCTGGGAACTCTCCGATGATAAGATAAAGGTTGTTCCTGCGTTAAGAATCAGTTATTACTATCTTCCTTCGAATTTAAAGGAGTGCTTTGTTTATTGTTCTTTATATCCCAAAGACTATGAATTTAGCAAAGATGAATTGATATTGTTATGGATGGCAGAGAATTTCTTGCAACCAGCAGGAAAAAAGACTCCAGAAGAAGTTGGTGATGAATATTTTGATGAATTGATTGCAAGATCATTTTTCCAACCTCATAAGATTCATGAAAACAAGTTTGTGATGCATGATCTCGTGCATGATTTGGCAATGATATTTGCTGGAGAATTCTATTTCAGAGCTGAAGAGCTTGAGAATGCAGTTGAGCTTGATATTAAAACTCGTCGTTTGTCACATAATGCCAAAGGCAATTATCCAATCTCAAAACTTTTGGGAGTTTGTGACCGAATAAAACACACAAGGACATTTCTTGGACTCAATTTGAATTCACAGATTCCATTTAACATGGAAAATGCACCTTGTATCTTGTTGTCAAAGTTGAAGTACCTGAGGGCTTTGTCGTTCAATTGCTTTCCTCTTGAGTCATTGCCTGATTCAATAGGCGAGTTGATTCATTTGCGTTACTTGGATTTGTCTTGGACCTACATCATGACATTGCCCGATACGCTTTGCAACTTGTACAATTTACAAACATTGAAGCTGGTTGGATGTCGGAAACTAAAGCCCTTCCTGTTAGCATGA 1896 0.3924 MAAEAVLSSVLSVVFDRMSSPEVVNWIKGKKLTQKLIERLKTNLYAVQAFLIDAEQKQIKERPVKDWLDSLKHAMYVADDLLDEVFTKAATQKDPGTFLSRFLNLQDRDVANRMEEVIDRIESLVIQKDTLGLREIPKENMSWRITTSLVETSDVCGREEDKEAIVKLLLDDNGDDDTGGHSDVSVIPIVGMGGIGKTTLAQLVYQDDKVKENFDFQAWICVSEEFDVFKVTKTIIEAITSSFCSLTDLNLLQHDLKEKLSRKKFFVVLDDVWSESYEDWDKLLKPFRNGVKGSKILITTRSKRVASVVQTVSPYELSLLSEEDCWLVFSKHARLSTGSMENPTLKKVGRDLVKKCDGLPLAAQSLGGLLRGNSDIKYWNHLLKSEIWELSDDKIKVVPALRISYYYLPSNLKECFVYCSLYPKDYEFSKDELILLWMAENFLQPAGKKTPEEVGDEYFDELIARSFFQPHKIHENKFVMHDLVHDLAMIFAGEFYFRAEELENAVELDIKTRRLSHNAKGNYPISKLLGVCDRIKHTRTFLGLNLNSQIPFNMENAPCILLSKLKYLRALSFNCFPLESLPDSIGELIHLRYLDLSWTYIMTLPDTLCNLYNLQTLKLVGCRKLKPFLLA* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3651 631 Gene3D Ribonuclease Inhibitor 527 629 IPR032675 -
Amo20g3651 631 Gene3D - 140 313 IPR027417 -
Amo20g3651 631 SUPERFAMILY L domain-like 479 624 - -
Amo20g3651 631 PANTHER - 42 618 - -
Amo20g3651 631 Gene3D - 404 489 IPR036388 -
Amo20g3651 631 PRINTS Disease resistance protein signature 356 370 - -
Amo20g3651 631 PRINTS Disease resistance protein signature 609 625 - -
Amo20g3651 631 PRINTS Disease resistance protein signature 186 201 - -
Amo20g3651 631 PRINTS Disease resistance protein signature 259 273 - -
Amo20g3651 631 Pfam NB-ARC domain 182 385 IPR002182 GO:0043531
Amo20g3651 631 Gene3D - 319 403 IPR042197 -
Amo20g3651 631 PANTHER DISEASE RESISTANCE PROTEIN RP 42 618 IPR044974 GO:0006952
Amo20g3651 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 419 IPR027417 -
Amo20g3651 631 Gene3D - 11 108 - -
Amo20g3651 631 Pfam Rx N-terminal domain 6 95 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3651 Amo-Chr20 147010759 147012654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3651 183 488 WRKY Transcription Factor Family AT5G45050 25.868 6.54e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3651 - - adu:107472405 853.973