Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3635 ATGATTAAGAAATGCTGCAATAGAATTTCTGATATTGTATATAAGGAGTATCACATTTTGAACTTACATACACATACACATACTAATATTGAACATACAAAGCCAAAAATGGTTAGAATCAAATGTATCCACACTGTAATTCCTACCGAAGCTACCCCAAATGGCACTTTGTTGCTCTCTGAGAGTGAGCAAATCAATGCTCATACTCATGCACTCACAATTTACATTTACCGTGCAAATCACGATCACAACCACTACAATATCATTGACACAATCAAACACTCCCTTGGCAACATCTTGATTCTTTACTACCCTCTCGCCGGCCGCCTTCGCATGATTGAAGGCGGAAGAATGGAAATTGACTGTAACGGGGAGGGTGTAATGCTGTTCGAAGCGGAGTCCCTGAAAACATTGCAAGACTACGGTGATTTCGTGCCCAGGGCCGCCTTGAGGCCGCTTCTGCCGACGGTTGATTACCGTGAGCCTGTGGAAAACATTCCTCTTGTTCTGGTGCAGGTGACGAGATTCGCGTGTGGTGGCCTGTGTGTTGGGTTTGGAGTTTCCAATGTCGTTGTGGATGGAATCTCTGGCACTGTCTTCGTTGACGCTTGGGCTAAGCTTGCTCGAGGTGGCACTTTGGGAGAAGATGAGAAGCCAATTCTTGATAAAATGGTGATTCTAAAATCTGAGTTTATCGGACCGCGTTTTGTGCACCGTGAATTCAAGCCACTTCCGCTGATAATTGGTAGCTCTGACGTCAGTGAGGAGAGCAAGAAGGAAACAGATCTTGCAATTCTGAAGCTCACAAGGGAGATGGTAGAAAAGCTGAGGAAGAAAGCCAATGACGACGGATGCTTGGAATTTGGTTACGAGGAGCCAGTTACGCCGCAGAATCACCATCGACCCTACAGCAGGTATGAAAGCATTGCCGCTCATATCTGGAGGTGTGCATGCAAGGCACGCCACGTGGATCACAACCAACCCACGGTGGTCCTCACTGTCGCCGGCGTCCGAAACAGGCTAAAGCCACCTCTCCCTCTAAACTATTTCGGGAACGCGACGCACCCAACTGTGACCCCCACATGCCTCAGTGGGGATATTGCTTCAAAGCCACTAACATATGGTGCGCAAAAGATAAGAGAAGCGATCGAGTTGCTGACAGATGAGTACCTGAGATCAGCCTTTGAGTTCATTGGGAGGCAGGACCATGTAGGGTGGCTGAGGCCAAAGCTTAACAGTGAACCACCATTTCTTGGGAATCCAAACCTCAACATTTGGAGTTGGATGAGTAACATGCCTACCTATGGACCTGATTTTGGATGGGGAAGGCCGCTGTATATGGGACCCTGTGAGGTCATCGGAGACGGCAGGGCCTTTATCATGCCTGCTCCTACCGGAGATGGGACTCTTTCCGTTGTCATTCGCTTGCAGACTCCTCATCTTCAACCATTTGAGAAGTTCTTCTACGAGGACATATAG 1479 0.4787 MIKKCCNRISDIVYKEYHILNLHTHTHTNIEHTKPKMVRIKCIHTVIPTEATPNGTLLLSESEQINAHTHALTIYIYRANHDHNHYNIIDTIKHSLGNILILYYPLAGRLRMIEGGRMEIDCNGEGVMLFEAESLKTLQDYGDFVPRAALRPLLPTVDYREPVENIPLVLVQVTRFACGGLCVGFGVSNVVVDGISGTVFVDAWAKLARGGTLGEDEKPILDKMVILKSEFIGPRFVHREFKPLPLIIGSSDVSEESKKETDLAILKLTREMVEKLRKKANDDGCLEFGYEEPVTPQNHHRPYSRYESIAAHIWRCACKARHVDHNQPTVVLTVAGVRNRLKPPLPLNYFGNATHPTVTPTCLSGDIASKPLTYGAQKIREAIELLTDEYLRSAFEFIGRQDHVGWLRPKLNSEPPFLGNPNLNIWSWMSNMPTYGPDFGWGRPLYMGPCEVIGDGRAFIMPAPTGDGTLSVVIRLQTPHLQPFEKFFYEDI* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3635 492 Pfam Transferase family 37 490 - -
Amo20g3635 492 Gene3D - 34 243 IPR023213 -
Amo20g3635 492 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 41 492 - -
Amo20g3635 492 Gene3D - 250 491 IPR023213 -
Amo20g3635 492 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 41 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3635 Amo-Chr20 146848894 146852604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3635 38 490 Monolignol Biosynthesis Gene Families AT5G48930 35.982 1.28e-97 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3635 K13065 - gmx:100779652 561.607