Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3628 ATGGATTTCACAGCGGAGAAGAAGGAATTGGAGAGCAACAACAACAACACTAACTCTGACACTGCTCAGCGAACCCTAGATTCTTCTTCCGAAGTCGAGGAGCGCCATGCTCGTGATCTTAAAGCTGGTCTTCACCCTCTAAAGCACAAATTTGTATTTTGGTACACACGGCGAACACCAGGAGTTCGAAATCAAACATCATATGAGGATAACATTAAGAAGATTGTTGATTTCAGTACTGTTGAAGGATTTTGGGTTTGCTATTGCCATCTTGCTCGACCTTCTTCTTTGCCTAGTCCAACAGATTTGCATCTTTTTAAGGAAGGAATCCGACCCCTTTGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGGTTCAAAAAAGCTGTCTCGGGTCGTTTTTGGGAGAACCTGGTTCTTGCCTTAGTAGGTGACCAATTGGATTATGGAGATCAGATATGTGGTGCAGTACTTAGCATTCGTTTTAATGAAGATATACTTAGCGTCTGGAATCGCAACGCTTCTGACAATCAGGCTGTAATGGCTCTCAGAGATTCCATTAAGCGCCATTTAAAGCTTCCTCATGGCTATATTATGGAGTACAAGCCCCATGATGCCTCCCTAAAGGACAATTCATCTTACAGGAACACTTGGTTGAGAGGCTAG 675 0.4341 MDFTAEKKELESNNNNTNSDTAQRTLDSSSEVEERHARDLKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWENLVLALVGDQLDYGDQICGAVLSIRFNEDILSVWNRNASDNQAVMALRDSIKRHLKLPHGYIMEYKPHDASLKDNSSYRNTWLRG* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3628 224 SUPERFAMILY eIF4e-like 23 220 IPR023398 -
Amo20g3628 224 MobiDBLite consensus disorder prediction 10 26 - -
Amo20g3628 224 Pfam Eukaryotic initiation factor 4E 46 204 IPR001040 GO:0003723|GO:0003743|GO:0006413
Amo20g3628 224 ProSitePatterns Eukaryotic initiation factor 4E signature. 102 125 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Amo20g3628 224 MobiDBLite consensus disorder prediction 1 32 - -
Amo20g3628 224 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 26 224 IPR001040 GO:0003723|GO:0003743|GO:0006413
Amo20g3628 224 Gene3D RNA Cap, Translation Initiation Factor Eif4e 7 219 IPR023398 -
Amo20g3628 224 PANTHER BNAA10G16710D PROTEIN 26 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3628 Amo-Chr20 146797635 146800343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3628 15 224 Eukaryotic Initiation Factors Gene Family AT5G18110 77.143 6.13e-123 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3628 K03259 - gmx:100499744 416.387