Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3619 CAGCGACAGCTAGCACCCCCATCCACATCCTCTTTATCATCTTCATCCTCACTCACACGAATCACTCAAAGGAAAAAACTCTCATTGCCAAAACGACGTCGTTTATCGGTTTCTTCCTTCATCTCTTCGATTCCCGTTACGCTAACAGAGCTGGACTCGCAGCATTTGAACTCTCCCTCCTCCGCCGCCGTTTCCTGCAACGGCAAGATCCGCCACCGGTCGCCATCCTCCACCGAGCTCCTCGACGGCCATACTGCCACCTCGCCGTCGTCCTCCTCCGTGGAGCTGCCAGAACTCGGATTCGGAAGAATGCTGAAGCGGTTGCCGCATGAGTCGTCCTCCGACAAGATTTACCAGCTCCGCGGAGCGCTAATGATGGTGGCCGTTCCTTTGGTGCTCGTCACGATTGTGCTTTACGTGTTGCCTTCCATTTCCTCCAACGAGTCCATCGAAGATTACACCCTCACGCACCGGAAGATTTCGCCCGATAACAGAGCCTCTAGCTCCTACGCCGTCGTCTTCGATGCTGGCAGCTCCGGCAGCCGCGTTCACGTTTTCCACTTCGACCGCAATCTCAACCTTGTTCACATTGGCAAAGATCTCGAGCTATTCGTTCAGATTAAACCAGGTTTGAGTGCGTATGCACAGAATCCACAACAGGCAGCGGAGTCTCTGATTACACTTCTGGACAAAGCTGAAAGTGTTGTTCCTCTGGAGTTTCGCCCCAGAACACCTGTTAGAGTAGGGGCAACTGCAGGATTGAGAGCTTTGGAAGGGGATGCTTCTGACAGGATCTTGGAAGCGGTCAGGGAATTGCTTAAGCAAAGGAGCACTTTGAAATCTGGGCCTAATGCTGTTACTGTGCTGGATGGAACCCAAGAAGGTGCTTTCCAATGGGTGACTATTAACTATTTGCTGGGAAACTTGGGAAAAGATTATTCAAAGACTATTGGGGTTGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCATCTCAGAGGCAGATTCTGCCAAGGCTCCAAAAGTACTTGGTGGAGAGGATCCATATGTCAAGGAGATGTTTTTAAGGGGAAGAAAATATTACCTCTATGTTCACAGTTACTTGCACTATGGTTTGCTAGCAGCTCGCGCAGAAATTTTAAAGGTTTCTGATGATTCTGGCAACCCGTGTGTTTTAGCTGGCTTTGATGGGTATTACAATTATGGAGGAAAGTCATTCAATTCCTCATCGTCCCCATCTGGCTCAAGATTGAATGAATGCAAAACCATGGCTCTTAAAGCTCTCAAAGTTAATGAGTCAAAATGTACACATATGAAGTGCACATTCGGAGGGATTTGGAATGGTGGCGGCGGGGATGGACAGAAAAACCTTTTTGTTGCCTCATTTTTCTTTGACCGTGCTGCCGAGGCGGGTTTTGCCGATCCAAACTTGCCCATTGTCAAAGTTCGTCCTGTGGACTTCGAGGTCGCAGCTAAGCGAGCTTGTCAAACAAAACTTGAGGAAGCAAAATCAGCTTATCAACGTGTGGAGGAGGGGAACCTACCATATTTATGCATGGATCTTGTATACCAGTATACATTACTTGTAGCTGGATTTGGTCTCGATCCACGGCAACCGATTACATTGGTGAAAAAGGTTCAGTACCGTGATGCTCTTGTTGAAGCAGCATGGCCCCTCGGCAGCGCCATAGAAGCTGTGTCATCTACGTAA 1716 0.4878 QRQLAPPSTSSLSSSSSLTRITQRKKLSLPKRRRLSVSSFISSIPVTLTELDSQHLNSPSSAAVSCNGKIRHRSPSSTELLDGHTATSPSSSSVELPELGFGRMLKRLPHESSSDKIYQLRGALMMVAVPLVLVTIVLYVLPSISSNESIEDYTLTHRKISPDNRASSSYAVVFDAGSSGSRVHVFHFDRNLNLVHIGKDLELFVQIKPGLSAYAQNPQQAAESLITLLDKAESVVPLEFRPRTPVRVGATAGLRALEGDASDRILEAVRELLKQRSTLKSGPNAVTVLDGTQEGAFQWVTINYLLGNLGKDYSKTIGVVDLGGGSVQMAYAISEADSAKAPKVLGGEDPYVKEMFLRGRKYYLYVHSYLHYGLLAARAEILKVSDDSGNPCVLAGFDGYYNYGGKSFNSSSSPSGSRLNECKTMALKALKVNESKCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNLPIVKVRPVDFEVAAKRACQTKLEEAKSAYQRVEEGNLPYLCMDLVYQYTLLVAGFGLDPRQPITLVKKVQYRDALVEAAWPLGSAIEAVSST* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3619 571 MobiDBLite consensus disorder prediction 1 24 - -
Amo20g3619 571 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 289 304 IPR000407 GO:0016787
Amo20g3619 571 Gene3D - 170 565 - -
Amo20g3619 571 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 105 571 IPR000407 GO:0016787
Amo20g3619 571 Gene3D Exopolyphosphatase. Domain 2 290 549 - -
Amo20g3619 571 MobiDBLite consensus disorder prediction 57 94 - -
Amo20g3619 571 MobiDBLite consensus disorder prediction 1 28 - -
Amo20g3619 571 PANTHER APYRASE-LIKE PROTEIN 105 571 - -
Amo20g3619 571 Pfam GDA1/CD39 (nucleoside phosphatase) family 166 570 IPR000407 GO:0016787
Amo20g3619 571 CDD NBD_sugar-kinase_HSP70_actin 172 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3619 Amo-Chr20 146736873 146741749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3619 110 570 Calmodulin-binding Proteins AT3G04080 67.462 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3619 K14641 - gmx:100804818 753.821