Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3611 ATGGTTGGTGCCAATAGAATTGTGAGCTTATTCTTATTTCACTTTTTCTTGGTGACTCAATCAGCACCAACAAAAAATATTGTGAATCAAGTTCCAGGGTTTGATGGAAAACTACCTTCCAAACACTATGCCGGGTATGTGACGGTAGATGAAGATCATGGAAAGAACCTATATTATTATTTTGTTGAATCAGAGTCCGACCCGAAAAAGGACCCGGTGGTTCTATGGCTTAATGGTGGACCCGGTTGTTCCAGCTTCGATGGTTTTGTATATGAGCATGGTCCATTTAATTTTGAAAAACCAAAGGCTAAAGGAGTCTTGCCTAAGTTGACTCTCAACAAATATAGTTGGTCAAAGGTTTCAAATATCATATACTTGGATTCTCCTGCTGGAGTTGGGTTCTCTTACGCAAAAAATGAATCAGCTTATGAAACTGGGGATATAAGAGTTGCCCATGATACACACGTTTTTCTCCTTAAGTGGTTTCAACTGTACCCCGAGTTCCAACACAACCAATTTTTCTTAGCTGGAGAATCATTTGCTGGGATTTATGTGCCTACTCTTGCTAATAACATAGTCAAAGGAATTGAAGATGCAAGGATGCAGCCAATAATAAATTTCAAGGGTTACATGATAGGAAATGGTGTCTGTGATGATAAATTTGATGGCAATGCTCTTGTTCCGTTTGCATATGGGATGGGTCTTATTTCTGAAGAAATATTCAAGGAGACAGAAAGTGTTTGCAAAGGAAGCTACTACAATCCTCAAACTAAGGATTGCGCATCACAGCTTTCTAAAGTAAACCAGCTTATTAGTGGGCTAAACATATATAACATTTTGGAACCATGTTACCATAGCAATGGAACAGACACAAGAAGTACAAGATCTAATAATAATAGGTTGCCAGAAAGCTTTAAGCAATTGGGTGTAACAGAGAGAGCTTTGCCAGTTCGGAAGAGAATGTTTGGTCGTGCATGGCCTTATGGAGCTATTGTCAAAAATGGAATTGTCCCATCTTGGCCACAACTCACCCATGGAGGTCTTGATGTTCCATGCACTGATGATGAAGTTGCTTCCGAATGGTTGAACAATGATGCAGTTAGAAAAGTACTTCACACAGCAGATAAAAGTTTGGTTAAGAAATGGATATTATGCACAGACAAACTGACTTACCACCATCCTCTTGGAAGCATGATCAAGTATCACCAATACCTAACCTTCCGCGGTTATCGAGCACTTATATTTAGTGGTGATCATGACATGTGTGTTCCATACACCGGAAGCCAAGCATGGACAAGTTCATTGGGATATAAGATTATAGATGAATGGAGGCCTTGGTTTGTAGATGGTCAAGTTGCCGGGTTTACACAAGGATACGAATTCAATCTTACATTTTTAACCATAAAGGGAGCTGGCCACACTGTTCCAGAATATAAGCCTAAAGAGTCATTGCACTTTTACAAACAATTTATTCATGGAAAGAAAATATGA 1491 0.3917 MVGANRIVSLFLFHFFLVTQSAPTKNIVNQVPGFDGKLPSKHYAGYVTVDEDHGKNLYYYFVESESDPKKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEKPKAKGVLPKLTLNKYSWSKVSNIIYLDSPAGVGFSYAKNESAYETGDIRVAHDTHVFLLKWFQLYPEFQHNQFFLAGESFAGIYVPTLANNIVKGIEDARMQPIINFKGYMIGNGVCDDKFDGNALVPFAYGMGLISEEIFKETESVCKGSYYNPQTKDCASQLSKVNQLISGLNIYNILEPCYHSNGTDTRSTRSNNNRLPESFKQLGVTERALPVRKRMFGRAWPYGAIVKNGIVPSWPQLTHGGLDVPCTDDEVASEWLNNDAVRKVLHTADKSLVKKWILCTDKLTYHHPLGSMIKYHQYLTFRGYRALIFSGDHDMCVPYTGSQAWTSSLGYKIIDEWRPWFVDGQVAGFTQGYEFNLTFLTIKGAGHTVPEYKPKESLHFYKQFIHGKKI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3611 496 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Amo20g3611 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Amo20g3611 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Amo20g3611 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Amo20g3611 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Amo20g3611 496 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 14 494 - -
Amo20g3611 496 Pfam Serine carboxypeptidase 32 493 IPR001563 GO:0004185|GO:0006508
Amo20g3611 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 494 IPR001563 GO:0004185|GO:0006508
Amo20g3611 496 Gene3D - 348 496 - -
Amo20g3611 496 SUPERFAMILY alpha/beta-Hydrolases 28 494 IPR029058 -
Amo20g3611 496 Gene3D alpha/beta hydrolase 20 326 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3611 Amo-Chr20 146664629 146675159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3611 357 496 Calmodulin-binding Proteins AT2G22960 44.286 3.97e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3611 K16296 - gmx:100792057 706.057