Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3586 ATGAAGAACATTCTCAAGAAGCTTCATATCATGCCTACTACTAACCAATCACAAGAGGACCAAGCTCCTGCTTCATCAAGGTCCAACAAGAAGATTTCAAATTGGTTGCATTCTGTATCCAATAGGCAGACTCCGATTCCGACTCCGGCGACGGCGACGGCGACGGAGACGGAGCCTTCTGATTCACTTGCCGGTGGCGGTTTGGATTCGGCGCCGTCTAGCACTTTTAGGGAACCTGAAGTGGAAGACGACGACGAAGAAGAAGAATATCAGATACAGCTTGCTTTAGAGCTTAGTGCAAAGGAGGATCCTGAGGCTGTTCAGATTGAAGCTGTTAAGCAGATTAGTTTGGGATCCTGTGATCCTCATAACACGCCGGCACAAGTCGTTTCATATCGGTACTGGAATTACAATGCTCTTGGTTTTGATGACAAGATCTCGGATGGTTTCTATGATCTGTATGGGACTGTGACCGAGTCTAACTCTGCAAGAATGCCATGCCTTTTGGATCTGCAAGGAACATCAACTTCAGATTCTGTCACTTGGGAAGCAATCTTGGTCAATAGGGCTGCAGATTCCAGTTTGTTGAAACTCGAGCAGGAGGCCCAAGAGCTGGCAGCTAAGGCAAGAAAAGATTTTGAGGTAGTTGTAGATAGTAATTTGGTGCATAAGCTTGCTATCTTAGTGGCTGACTACATGGGTGGACCAGTTGAAGATCCTGAAAGCATGGCAAGAGCCTGGAGGAGTCTCAGTTACAGTTTAAAAGCAACCCTTGGTAGTATGGTGTTACCACTGGGCTCGCTGACCATAGGATTGGCTAGGCATCGTGCCTTGTTGTTTAAGGTTTTAGCTGATAGTGTGGGCATCCCATGTCAGCTGGTGAAAGGACTACAATATACAGGTTCCGACGATGTGGCTATGAACTTTGTCAAGATTGATGACGGGAGGGAGTACATTGTTGACCTGATGGCTGATCCAGGAACACTTATTCCTTCTGATGCAGCTGGATCACACATTGACTATGATGAATCTTCTTTTGTAGCTACTCCTTCATCAAGAGACCTTGACTCCTCTCATATGGCATCATTTGGCAGTGGGGTTGGAAGTTCATTTGATGGAACTCTAGACTTTGGGACACAAGATAAAGGAAACAGATCAAAACATTCTGTCCATGCAGGGAAAGAATCTGATGTAATCAGTCCCACTACAGGCAGGGAAGAAGTAAAGAATGCCATAGATAAATTCAAAGGTGCTAGTAATGTGGAAAAGGTCATAGTGAGAGAATCTCCTAGCAGACTTAATTATCCATATATGCATGGAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCCGTGCATGGAATGAAAGTTAAAGATGTCTCCCAATATATGATTGACGCTGCAAAGGAGAACCCTAAATTAGCTCAAAAGCTTCATGATGTTTTACTTGAAAGTGGCGTTGTTGCTCCTCCAAACCTATTTACTGAAGTTTATCAGGAGCAGCTAGGTTCCCCATCTGAGGCAAATTTTCCAGTTGATGAAAAAGGTGAATCAAAACAGGGACGTATACAGCAAGATACTAAGGTTGATGATAATCAAGGTCTTGCTCAGTTTTTACCTCCTTTGCCCCTTCAGAGAGTACATGCCAAAGCAAGTCCTCGCAGTCAGCTGGACCATTCTAAGCCTTTAGAGGGTTTGGGAGTCAACTTACCTCTTGATACAAGGGAGGCTACTGGACAGCAAATATCGTCTCAGGCAGAAGCAACTCAGGTAAAATATGGGAAAAATGTCCCAGTTGCTGCGGCTGCTGCCGCCGCCGCTGCTGTTGTTGCATCTTCTATGGTAGTTGCTGTGGCGAAGTCAAGCACTGATTCAAATCTTGAGATTCCAGTAGCAGCAGCTGCCACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCCGCTGTCAGTAAACAGTATGAGCAGAGTAGTCGAAGTGATGCAGATGCAGAGGCTTCTGGTCATGATCTGAGGGGTAGTAGTGACGGAGAGCATGTTGCTTTAGGAGCAAACTCAGAGGGCGAGAGAATATCTGATAGATCAGCAAGAAGTGATAGTGCAAAATCGGATTCTGCCCTAGATGATGTTGCTGAGTATGACATTCCATGGGAGGAAATCATGATGGGCGAGCGTATTGGGCTTGGATCATATGGGGAAGTGTACCACGGTGATTGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTCTAGATCAAGCTATCTCTGGTGAATTACTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAGAGACTAAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGGCCTCCAAATCTTTCTATTGTTACTGAATTTCTTCCTAGAGGGAGTTTGTATAGGTTAATTCACCGACCTAACAATCAACTAGATGAGCGAAGGCGGTTGAGGATGGCCTTAGATGCTGCTCGTGGAATGAACTATTTGCACAGCTGCTCTCCAGTAATAGTGCATCGTGATTTGAAGTCCCCTAATCTTCTTGTAGACAAAAACTGGGTTGTAAAGGTTTGTGATTTTGGCTTATCACGAATGAAGCATAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCTTTCCAATGAAAAGTGTGATGTGTATAGCTTTGGGGTTATATTGTGGGAACTCTCTACACTGCAGCAACCATGGGAAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTTGGTTTCCAACATCGGCGTCTTGACATTCCAGATGATGTGGACCCTGCAGTGGCAGATATCATCAGGCAATGCTGGCAGACAGATCCAAAGTTGAGACCCACGTTTACCGAAATTATGGCTGCTTTGAAGCCATTGCAAAAGCCTATTACTGGTTCTCAAGTGGTAAGAACAGGTGGTCAGTCATCCAGAGCTGCCGAAGGCCCTGCATGA 3003 0.4525 MKNILKKLHIMPTTNQSQEDQAPASSRSNKKISNWLHSVSNRQTPIPTPATATATETEPSDSLAGGGLDSAPSSTFREPEVEDDDEEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPHNTPAQVVSYRYWNYNALGFDDKISDGFYDLYGTVTESNSARMPCLLDLQGTSTSDSVTWEAILVNRAADSSLLKLEQEAQELAAKARKDFEVVVDSNLVHKLAILVADYMGGPVEDPESMARAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSVGIPCQLVKGLQYTGSDDVAMNFVKIDDGREYIVDLMADPGTLIPSDAAGSHIDYDESSFVATPSSRDLDSSHMASFGSGVGSSFDGTLDFGTQDKGNRSKHSVHAGKESDVISPTTGREEVKNAIDKFKGASNVEKVIVRESPSRLNYPYMHGRSPSWTEGISSPAVHGMKVKDVSQYMIDAAKENPKLAQKLHDVLLESGVVAPPNLFTEVYQEQLGSPSEANFPVDEKGESKQGRIQQDTKVDDNQGLAQFLPPLPLQRVHAKASPRSQLDHSKPLEGLGVNLPLDTREATGQQISSQAEATQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSTDSNLEIPVAAAATATAAAVVATTAAVSKQYEQSSRSDADAEASGHDLRGSSDGEHVALGANSEGERISDRSARSDSAKSDSALDDVAEYDIPWEEIMMGERIGLGSYGEVYHGDWHGTEVAVKRFLDQAISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHSCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNELSNEKCDVYSFGVILWELSTLQQPWEGMNPMQVVGAVGFQHRRLDIPDDVDPAVADIIRQCWQTDPKLRPTFTEIMAALKPLQKPITGSQVVRTGGQSSRAAEGPA* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3586 1000 ProSiteProfiles Protein kinase domain profile. 721 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3586 1000 Pfam Ethylene-responsive protein kinase Le-CTR1 127 330 - -
Amo20g3586 1000 Coils Coil 188 208 - -
Amo20g3586 1000 MobiDBLite consensus disorder prediction 376 404 - -
Amo20g3586 1000 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 83 988 - -
Amo20g3586 1000 SUPERFAMILY Protein kinase-like (PK-like) 709 971 IPR011009 -
Amo20g3586 1000 Gene3D Transferase(Phosphotransferase) domain 1 800 984 - -
Amo20g3586 1000 MobiDBLite consensus disorder prediction 1 88 - -
Amo20g3586 1000 MobiDBLite consensus disorder prediction 9 60 - -
Amo20g3586 1000 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 83 988 - -
Amo20g3586 1000 ProSitePatterns Protein kinases ATP-binding region signature. 727 748 IPR017441 GO:0005524
Amo20g3586 1000 PRINTS Tyrosine kinase catalytic domain signature 944 966 IPR001245 GO:0004672|GO:0006468
Amo20g3586 1000 PRINTS Tyrosine kinase catalytic domain signature 834 852 IPR001245 GO:0004672|GO:0006468
Amo20g3586 1000 PRINTS Tyrosine kinase catalytic domain signature 900 922 IPR001245 GO:0004672|GO:0006468
Amo20g3586 1000 PRINTS Tyrosine kinase catalytic domain signature 795 808 IPR001245 GO:0004672|GO:0006468
Amo20g3586 1000 PRINTS Tyrosine kinase catalytic domain signature 881 891 IPR001245 GO:0004672|GO:0006468
Amo20g3586 1000 CDD STKc_MAP3K-like 727 973 - -
Amo20g3586 1000 SMART serkin_6 721 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3586 1000 MobiDBLite consensus disorder prediction 659 677 - -
Amo20g3586 1000 MobiDBLite consensus disorder prediction 656 704 - -
Amo20g3586 1000 Pfam Protein tyrosine and serine/threonine kinase 722 973 IPR001245 GO:0004672|GO:0006468
Amo20g3586 1000 Gene3D Phosphorylase Kinase; domain 1 714 798 - -
Amo20g3586 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3586 Amo-Chr20 146369914 146379246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3586 1 987 MAP Kinase Kinase Kinase AT1G73660 61.742 0.0 1135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo20g3586 PK_Tyr_Ser-Thr 9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3586 - - aip:107622443 1473.76