Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3584 ATGGGGTCTCAAGGTGGTGGTGAAAGTAATGGTAAACATGCACAGCTTCAGCCTTTGGCACGGCAAAACTCAATGTACAGTCTTACGCTCGATGAGGTTCAGAATCAATTAGGTGACTTAGGAAAACCCCTAGCTAGTATGAACCTTGATGAGCTTCTAAAAAATGTATGGACTGCTGAGGCCAACCAGTCTATAGGTATGGAAATTGACCGCACAACACAAGCTAATCAAGCTGCGCTGCAGCATCAAGCTAGTCTATCGATAACTAGTGCGCTTGGCAAGAAGACAGTTGATGAGGTATGGAGAGATATCCAGCAACATAAAGATAACAACGAGAAGAAGCCTCGAGACAGACAAGCTACATTGGGAGAGATGACCTTGGAGGCTTTCTTGGCGAAAGCAGGGGTCGGGATTGTCCCTGAAGCATCGGGTAATACTAAAAGTGCTGGTCCTTTAGCTGTTGCTGATTCTAATTTAACAGCACCACCATTCCCTCCACAAGGTCCAATGATGCAATATGCACAACCACAGTATCAGCATCCTCAGCAAAGTTTAATGGGGATGTATATGGCTGGCCAGAACATAGCACAGCCATTGCACATGGGGGCTGGTGCTGCTTTGGATGTTCCATATGCTGATGGTCAGGTGGCAATGCCTTCACCTTTGATGGGAAGCTTGTCCGATACGAAGATACATGGGAGGAAAAGGGGCACACCGGAGGACATATTGGAGAAGACGGTGGAAAGGAGGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGATCTAGAGCAAGGAAGCAGGCTTACACAACGGAATTAGAGAATAAGGTGTCGCGCCTGGAAGAGGAAAATGAAAAGCTGAGGAAACGGAAGGAACTAGAGAACCTGTTGTCTAGTGCACCCCCACCACCCCAACCTCGATATCAGATTCGCCGAACATCATCTGCGTCGTTCTGA 963 0.4777 MGSQGGGESNGKHAQLQPLARQNSMYSLTLDEVQNQLGDLGKPLASMNLDELLKNVWTAEANQSIGMEIDRTTQANQAALQHQASLSITSALGKKTVDEVWRDIQQHKDNNEKKPRDRQATLGEMTLEAFLAKAGVGIVPEASGNTKSAGPLAVADSNLTAPPFPPQGPMMQYAQPQYQHPQQSLMGMYMAGQNIAQPLHMGAGAALDVPYADGQVAMPSPLMGSLSDTKIHGRKRGTPEDILEKTVERRQKRMIKNRESAARSRARKQAYTTELENKVSRLEEENEKLRKRKELENLLSSAPPPPQPRYQIRRTSSASF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3584 320 MobiDBLite consensus disorder prediction 293 320 - -
Amo20g3584 320 CDD bZIP_plant_BZIP46 249 295 - -
Amo20g3584 320 Gene3D - 247 301 - -
Amo20g3584 320 PANTHER BZIP TRANSCRIPTION FACTOR 2 318 - -
Amo20g3584 320 MobiDBLite consensus disorder prediction 251 272 - -
Amo20g3584 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 247 292 IPR004827 GO:0003700|GO:0006355
Amo20g3584 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 252 267 IPR004827 GO:0003700|GO:0006355
Amo20g3584 320 SUPERFAMILY Leucine zipper domain 249 294 IPR046347 GO:0003700|GO:0006355
Amo20g3584 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 318 IPR043452 GO:0003700|GO:0045893
Amo20g3584 320 SMART brlzneu 245 301 IPR004827 GO:0003700|GO:0006355
Amo20g3584 320 Pfam bZIP transcription factor 249 293 IPR004827 GO:0003700|GO:0006355
Amo20g3584 320 Coils Coil 265 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3584 Amo-Chr20 146334700 146338800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3584 12 320 bZIP Transcription Factor Family AT3G56850 51.250 8.70e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo20g3584 bZIP_1 1.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3584 K14432 - gmx:100784924 442.195