Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3569 ATGATGGAAACGAAGCTCACTACTACTATCCTTGGATTCTTCTTGCTGAGCTTCTTCATCTGCTTCACCACAACAAGAGCACAATCATCATCCCCAAACTACGTTGGAGATGATTGCAAAAACTCGACGGAAGAATCCCTAACAAGTGGATTCAAAACCAACCTCAACAGCGTCCTCTCATGGCTTTCCTCTGATGCTGCCACAAGCAAGGGCTACAACCATACCGCCATCGGAACCGCCACTGGCGATGCCGTCTATGGCCTCTATGACTGCCGAGGTGACGTGACAGGCACCTTCTGCCAGTTTTGCGTGTCCACAGCAGCTTCAGACATTGTTCAGCACTGTCCAAACAGATCATCAGCAGTGATATGGTATAACTACTGCATACTCAGATACTCCAACCATGACTTCTTTGGAAACCTTACAATAACCCCATCATGGCAATTTCCTGGGACCAAGAACACCACCAACAGCACACAAGAACTCCAGGAAGCAGAGACTTACATGCAGAGCTTGATAAAGAATGCTACTGTGGAGACCAACTTGCTGTATGCAATGGGTGAGTTCAATTCTGGTGGTTCATCAGGGGAAAGGTATGGGTTCGTGCAGTGTAGCAGGGACCTTACTAGTGATCAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTACCAAAGTTGGATGGCAAGTTTTGGCTCCAAGTTGTTTGATCAAGTATGATGATTTTATGTTCTACAAGATTACTACCAGTCAAGCACCTTCTCCATTATTGAATTCAGGCAATAACAAGGGTACAAGTAAGACAAAAACTGTGATAATCATCATAGTGAGTGTGTTGGTGGCATTAGTTCTACTAAGTTGTGGCATCTACTTCTTATGGAGGAAGAATCAATCAAATCATGATGCATTATTGTCAGAGACCACTCCTATATCAATACATTATAACCCTTATCAAGGTCAAGGAGATGATTCATTGAATGCTGACCTTCCTACAATCCCTCTATTTTGGATTCGACAGAACACTAATAACTTTTCAGATTCTTGCAAATTAGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGCTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTCTCAAAAACATCTGGCCAAGGTTTAGATGAGTTCAAGAATGAAGTAATATTCATAGCCAAACTACAACATAGGAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGGAAAATGAAAAGCTGCTTATATACGAGTACATGTCCAATTCAAGCCTTGCCCTTCATCTATTCGACGTGGAAAAACGAAAGCAACTAAGTTGGAAGGTTCGAATGAATATTATCAAAGGAATCGCACGAGGACTTCTGTACCTTCACGAAGATTCTAGACTTAAAATAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATATCAGATTTTGGATTAGCAAGGACATTTGAAAAAGGCCAGAATGAAGAAAACACTCGAAGGCGGATATATGGCTCCCGAATATGCCATGGAAGGGTTATATTCAAAATCATTGCTGGCAAAAGAAATAGTGGATTCTATCTTTCAGATCATGGTCAAAGTCTTCTTGTATATAGTTGGAAACTATGGTGTGAAGGAGAATGTTTAGAGTTAGTAGATCCTATATTAGAAAATACATACATAAGAAGTGAAGTTATAAGGTGTATTCATATTGGTTTGCTGTGTGTACAAGAAGATGCAATAGATCGACCAACAATGTCTACGGTGGTTGTTATGCTAGCAAGCGAGACAATGACACTTCCTAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGTTCGGTAAAGAAGACGAATCAACGTCAAAGACTTCTAAAGATAATATCTCTGTCAATGAAGTATCAATGTCAAATGTTTTTCCTAGATAA 1959 0.4022 MMETKLTTTILGFFLLSFFICFTTTRAQSSSPNYVGDDCKNSTEESLTSGFKTNLNSVLSWLSSDAATSKGYNHTAIGTATGDAVYGLYDCRGDVTGTFCQFCVSTAASDIVQHCPNRSSAVIWYNYCILRYSNHDFFGNLTITPSWQFPGTKNTTNSTQELQEAETYMQSLIKNATVETNLLYAMGEFNSGGSSGERYGFVQCSRDLTSDQCRQCLNAMLDQVPKCCATKVGWQVLAPSCLIKYDDFMFYKITTSQAPSPLLNSGNNKGTSKTKTVIIIIVSVLVALVLLSCGIYFLWRKNQSNHDALLSETTPISIHYNPYQGQGDDSLNADLPTIPLFWIRQNTNNFSDSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLDEFKNEVIFIAKLQHRNLVRLLGCCVEENEKLLIYEYMSNSSLALHLFDVEKRKQLSWKVRMNIIKGIARGLLYLHEDSRLKIIHRDMKASNVLLDQDMNPKISDFGLARTFEKGQNEENTRRRIYGSRICHGRVIFKIIAGKRNSGFYLSDHGQSLLVYSWKLWCEGECLELVDPILENTYIRSEVIRCIHIGLLCVQEDAIDRPTMSTVVVMLASETMTLPNPNHPAFSVGRKFGKEDESTSKTSKDNISVNEVSMSNVFPR* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3569 652 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Amo20g3569 652 Pfam Domain of unknown function (DUF3403) 605 652 IPR021820 GO:0004674
Amo20g3569 652 Pfam Salt stress response/antifungal 158 246 IPR002902 -
Amo20g3569 652 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Amo20g3569 652 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 520 649 - -
Amo20g3569 652 PANTHER PROTEIN KINASE DOMAIN 520 649 - -
Amo20g3569 652 Gene3D Transferase(Phosphotransferase) domain 1 519 612 - -
Amo20g3569 652 Gene3D Transferase(Phosphotransferase) domain 1 426 518 - -
Amo20g3569 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Amo20g3569 652 ProSiteProfiles Protein kinase domain profile. 350 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3569 652 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 513 - -
Amo20g3569 652 SUPERFAMILY Protein kinase-like (PK-like) 335 616 IPR011009 -
Amo20g3569 652 Pfam Protein kinase domain 352 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3569 652 Gene3D - 33 137 IPR038408 -
Amo20g3569 652 Gene3D - 146 250 IPR038408 -
Amo20g3569 652 Gene3D Phosphorylase Kinase; domain 1 321 425 - -
Amo20g3569 652 SMART serkin_6 350 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3569 652 PANTHER PROTEIN KINASE DOMAIN 24 513 - -
Amo20g3569 652 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3569 Amo-Chr20 146162797 146168778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3569 15 652 Receptor kinase-like Gene Family AT4G05200 39.794 2.02e-156 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo20g3569 Pkinase 6.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3569 - - ahf:112718031 1013.06