Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3564 ATGGAAACAAAACTGACCACTACTCTGCATAGATTATTTCTTTGGTTCTTCTTGATGAACATCTTCATCACCATTACCAGAACAAAAGCACAATCATCAACCCTAAACTACGTTGGAGATGACTGCCAAAACTCAACAAAACAATCTCTAACAACTGGATTCAAAACCAACCTCAACAGCGTCCTCTCATGGCTTTCCTCTGATGCTACCACAAGCAAGGGCTACAACTATACCACCGTCGGAACCACCACCCGTGATGCCGTCTATGGCTTCTACAACTGCAGAGGTGATGTCACCGGAACCTTCTGCCAGTTTTGCCTCTCCACTGCAGCTTCAGACATTCTCCAGCACTGCCCAAACAGGTCATCAGCAGTGATATGGTATAACTACTGCATACTCAGATACTCTAACCATGCCTTCTATGGTAATCTTACAACTACCCCATCATGGCAAACTCTTGGGACCAAGAACAGCACCAACAGCACACAAGAACTCCAGAAAGCAGAGACTTATATGCAGATTTTGATAAAGAATGCTACTGCAGAGAACAATTACCTGTTGTATGCAGTGGGTGAGTTCAATGCTGGTGATTCATTAGGGAAAAGGTATGGATTGGTGCAGTGTACTAGGGACCTTACTAGTGACAAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTTCAAAAGTTGGATGGCAAGTTGGATCTCCAAGCTGTTTGACAAGGTATGATGATTATATGTTCTACAAGATTCAAGGATCTTCTCCTTTGCCTAATTCAGCCAAGAACAATTCAAGCAAGACAAAAACTGTGATCATCATCATAGCATGTGTGTTGGTGCCAGTAGTGCTACTAATTTCTGGCGTCTACTTATTATGGAGGAAGAATCAAATAGACAATGATGCATTATTGCCAGAGGACACTCCTATATCAATACAGTATAACTCTCAAGAAGGTCAAGGAGACGATTCATTGAATGCTGACCTTCCGGCAGTTCCTCTGATTTGGATTCGACAGAGCACTAATAACTTTTCAAATTCTTGCAAATTAGGGGAAGGTGGTTTTGGTCCCGTTTATAAGGGAAGTTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTTTCAAAAACATCTGGTCAAGGTTTATATGAGTTCAAGAATGAAGTAATATTCATAGCCAAATTACAACATAGGAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGCAAAATGAAAAGCTGCTTATATACGAGTACATGTCCAATTCAAGCCTTGCCCTTCACCTATTCGATGTGGAAAAACGAAAGCATCTAAGTTGGAAGGTTCGAATGAATATTATCAAAGGAATCGCACGAGGACTTCTATACCTTCACGAAGATTCTAGACTTAAAGTAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATTTCAGATTTTGGATTAGCAAGAGCATTTGAAAAAGGCCAAGACGAAGAAAATACTGGAAGGGTTATGGGCACCTACGGATATATGGCTCCTGAATATGCCATGGAAGGATTATATTCAATAAAATCAGACGTTTTTAGTTTTGGAGTTCTTCTACTAGAAATCATTTCTGGCAAAAAGAGCAGCGGATTCTATTTTTCAGAACATGGTCAAAGTCTTCTTATATATAGTTGGAAACTATGGTGTAAAGGAGAATGTTTGGAGCTAGTAGATCCTATACTAGAAGATAAATACCCAAGAAATGAAGTTAAAAGGTATATACATATTGGTTTACTGTGTGTACAAGCAGATGCAGTAGATCGACCAACAATGTCTACAATTGTTGTGATGCTAGCAAACGAGACAATGTCACTTCCTAATCCTAACCATCCTGCATTTTCAGTTGGAAGAAAGATCAAAGACGAGCCACCATCAAATACTTTTGTTAAGGATCTTTCGGTCAATAAAATATCAGTTTCAAATAGTTTACCTAGCCTCCTCTCATGGCTTTCATCTGATGGTGCCACAAGCAAGGGCTACAACTATACCACCGTTGGAACCGCCACACGCGATGTCATCTATGGCTTCTATAACTGCAGAGGTGATGTCACTGGAACCTTCTGCCAGTTTTGCCTCTCCACTGCAGCCGCAGACATTCCTCAGCACTGCCCAAACAGGTCATCAGCAGTGATATGGTATAACTACTGCATATTCAGATACTCCAACCATGCCTTCTATGGTAATCTTACAACAACCCCATCATGGCAAGTTCTTGGAACCAAGAACACCACCAACAGCACACAAGAACTCCAGAAAGCTGAGACTTATATGCAGATTTTGATAAAGAATGCTACTGCGGAGAGCAATTACCTGTTGTATGCAGTGGGTGAGTTCAATGCTGGTGGTTCATTAGGGAAAAGATATGGATTGGTGCAATGTACTAGGGACCTTACTAGTGACAAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTTCAAAAGTTGGATGGCAAGTTGGATCTCCAAGCTGTTTGACAAGGTATGATGATTATATGTTCTACAAGATTCAAGGATCTTCTCCCTTGCCTAGTTCAGCCAAGAACAGTTCAAGTAAGACAAAAACTTTGATTATCATCATAGTGAGTGTGTTTGTGCCAGTAATCCTACTAATTAGTGGCATCTACTTCATATGGAGGAAGAATCAATCAAATAATGATGCATTATTGTGTGAGAGCGCTCCTATATCAATAAATTATAACTCTCAAGAAGGTCAAGGAGAAAGTCAAGGAGACGATTCATTGAATGCTGACCTTCCTACAGTCCCTCTAATTTGGATTCGACAGAGCACTAATAACTTTTCAGATTCTTGCAAATTAGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGTTTGCAAGATGGGACAGAAGTTGCCATCAAAAGACTTTCTAAAACATCTGGCCAAGGTTTATATGAGTTCAAGAATGAAGTAATATTCATAGCCAAATTACAACATAGAAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGCAAAATGAAAAGCTGCTTATATACGAATACATGTCGAATTCAAGCCTTGCCCTTCACCTATTCGATGTGGAAAAGCGAAAGCAACTAAGTTGGAAGGTTCGAATGAATATTATTAAAGGAATCGCACGAGGACTTCTATACCTACACGAAGATTCTAGACTTAGAGTAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATATCAGATTTTGGATTAGCAAGAACATTTGAAAAAGGCCAGAACGAAGACAGTACTAGAAGGGTTGTGGGTACCTACGGATATATGGCTCCTGAATATGCCATGGAAGGATTATACTCAGTAAAATCAGATGTTTTTAGTTTTGGAGTTCTTCTACTAGAAATCATTTGTGGCAAAAGGAATAATAAATTCTATGTTTCAGAACATGGTCAAAGTCTTCTTGAATATAGTTGGAGACTATGGTGTACAGGAGAATGTTTAAAGCTAGTAGATCCTATATTAGAAAATAAATACACAAGAAATGAAGTTACAAGGTGTATACATATTGGTTTATTGTGTGTACAAGAAGATGCAGTAGATCGGCCGACAATGTCAACGGTGGTTGTTATGCTAGCAAGTGAGACAATGACACTTCCTATTCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGATCAAAGAAGAGCCAACATCAAGTGCTTTTGATAAGGATCCTTTGGTCAATGAAGTATCAATTTCAAATATTCTACCTAGATAA 3843 0.3919 METKLTTTLHRLFLWFFLMNIFITITRTKAQSSTLNYVGDDCQNSTKQSLTTGFKTNLNSVLSWLSSDATTSKGYNYTTVGTTTRDAVYGFYNCRGDVTGTFCQFCLSTAASDILQHCPNRSSAVIWYNYCILRYSNHAFYGNLTTTPSWQTLGTKNSTNSTQELQKAETYMQILIKNATAENNYLLYAVGEFNAGDSLGKRYGLVQCTRDLTSDKCRQCLNAMLDQVPKCCASKVGWQVGSPSCLTRYDDYMFYKIQGSSPLPNSAKNNSSKTKTVIIIIACVLVPVVLLISGVYLLWRKNQIDNDALLPEDTPISIQYNSQEGQGDDSLNADLPAVPLIWIRQSTNNFSNSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLYEFKNEVIFIAKLQHRNLVRLLGCCVEQNEKLLIYEYMSNSSLALHLFDVEKRKHLSWKVRMNIIKGIARGLLYLHEDSRLKVIHRDMKASNVLLDQDMNPKISDFGLARAFEKGQDEENTGRVMGTYGYMAPEYAMEGLYSIKSDVFSFGVLLLEIISGKKSSGFYFSEHGQSLLIYSWKLWCKGECLELVDPILEDKYPRNEVKRYIHIGLLCVQADAVDRPTMSTIVVMLANETMSLPNPNHPAFSVGRKIKDEPPSNTFVKDLSVNKISVSNSLPSLLSWLSSDGATSKGYNYTTVGTATRDVIYGFYNCRGDVTGTFCQFCLSTAAADIPQHCPNRSSAVIWYNYCIFRYSNHAFYGNLTTTPSWQVLGTKNTTNSTQELQKAETYMQILIKNATAESNYLLYAVGEFNAGGSLGKRYGLVQCTRDLTSDKCRQCLNAMLDQVPKCCASKVGWQVGSPSCLTRYDDYMFYKIQGSSPLPSSAKNSSSKTKTLIIIIVSVFVPVILLISGIYFIWRKNQSNNDALLCESAPISINYNSQEGQGESQGDDSLNADLPTVPLIWIRQSTNNFSDSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLYEFKNEVIFIAKLQHRNLVRLLGCCVEQNEKLLIYEYMSNSSLALHLFDVEKRKQLSWKVRMNIIKGIARGLLYLHEDSRLRVIHRDMKASNVLLDQDMNPKISDFGLARTFEKGQNEDSTRRVVGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGKRNNKFYVSEHGQSLLEYSWRLWCTGECLKLVDPILENKYTRNEVTRCIHIGLLCVQEDAVDRPTMSTVVVMLASETMTLPIPNHPAFSVGRKIKEEPTSSAFDKDPLVNEVSISNILPR* 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3564 1280 PANTHER PROTEIN KINASE DOMAIN 666 1277 - -
Amo20g3564 1280 PANTHER PROTEIN KINASE DOMAIN 31 665 - -
Amo20g3564 1280 SUPERFAMILY Protein kinase-like (PK-like) 335 636 IPR011009 -
Amo20g3564 1280 ProSiteProfiles Gnk2-homologous domain profile. 644 748 IPR002902 -
Amo20g3564 1280 Gene3D Phosphorylase Kinase; domain 1 925 1037 - -
Amo20g3564 1280 Gene3D Phosphorylase Kinase; domain 1 315 425 - -
Amo20g3564 1280 ProSiteProfiles Protein kinase domain profile. 350 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3564 1280 ProSiteProfiles Gnk2-homologous domain profile. 754 862 IPR002902 -
Amo20g3564 1280 Pfam Protein tyrosine and serine/threonine kinase 966 1230 IPR001245 GO:0004672|GO:0006468
Amo20g3564 1280 Pfam Protein tyrosine and serine/threonine kinase 354 620 IPR001245 GO:0004672|GO:0006468
Amo20g3564 1280 ProSiteProfiles Protein kinase domain profile. 962 1248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3564 1280 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Amo20g3564 1280 CDD STKc_IRAK 968 1233 - -
Amo20g3564 1280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Amo20g3564 1280 Gene3D Transferase(Phosphotransferase) domain 1 1038 1240 - -
Amo20g3564 1280 Gene3D Transferase(Phosphotransferase) domain 1 426 631 - -
Amo20g3564 1280 Gene3D - 35 140 IPR038408 -
Amo20g3564 1280 Gene3D - 652 748 IPR038408 -
Amo20g3564 1280 Gene3D - 755 862 IPR038408 -
Amo20g3564 1280 Gene3D - 147 254 IPR038408 -
Amo20g3564 1280 ProSiteProfiles Gnk2-homologous domain profile. 146 254 IPR002902 -
Amo20g3564 1280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1083 1095 IPR008271 GO:0004672|GO:0006468
Amo20g3564 1280 SMART serkin_6 962 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3564 1280 SMART serkin_6 350 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3564 1280 Pfam Domain of unknown function (DUF3403) 1235 1280 IPR021820 GO:0004674
Amo20g3564 1280 SUPERFAMILY Protein kinase-like (PK-like) 947 1248 IPR011009 -
Amo20g3564 1280 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 666 1277 - -
Amo20g3564 1280 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 665 - -
Amo20g3564 1280 CDD STKc_IRAK 356 621 - -
Amo20g3564 1280 Pfam Salt stress response/antifungal 771 860 IPR002902 -
Amo20g3564 1280 Pfam Salt stress response/antifungal 664 745 IPR002902 -
Amo20g3564 1280 Pfam Salt stress response/antifungal 42 137 IPR002902 -
Amo20g3564 1280 Pfam Salt stress response/antifungal 162 252 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3564 Amo-Chr20 146112069 146123426 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3564 4 667 Receptor kinase-like Gene Family AT4G05200 41.270 1.43e-156 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo20g3564 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3564 - - ahf:112718031 1323.15