Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3559 ATGGCAAGTGAAAAGGTTAGACGTTACACCAAATTTGTTGAGAACTCTCAGCTTTATTTGGCTATGATTTTTTTGCAGTTTGTGTATGGTGGCATGAACATTATAACTAAAGTGTCGCTTAACCAAGGCATGAGCCATTATGTTCTTGTGGTTTATCGCCACGTCTTTGCAACTGTTGCCATTGCTCCATTTGCTATCATCTTTGAAAGGAAACATCAACCAAGGATAACATTCCCAATTTTCATACAAATTTTTATCCTAGCTCTGCTTGGGCCTGTGATTGATCAAAATTTGTACTATGCTGGGTTGAAATTCACTTCACCAACCTTCGCATGTGCACTGAGCAACACACTTCCTGCCATGACATTTGTGATGGCTGTTTTATGCAGGATGGAGAAGATGAACATAAAGAAAGTGAGGTGTCAAGCTAAGGTAATGGGCACCGTTTTTACTGTAGGTGGGGCCATGGTGATGACCTTGTACAAAGGTCCTATTGTGGAGATGGTGTGGACCAAACATCATAGGACTAAAATCAATAATACCCAAATATCCTCGGACAAACAATGGTTCATAGGCTCCATCTTTATTATCCTTTCTACCCTAGCTTGGGCATCCCTCTTTGTTTTACAGGCGAAAGTGATAGAAACCTACAAGAATCATCAACTTAGCCTCACATCACTAATCTGCTTCATAGGAATTATTCAAGCTACTGTTGTTACTTTTTTAATGGAACGCAAAACTTCAGTCTGGTTAATTGGCTGGGATATGAACTTACTCGCTGCTGCTTATGCTCATGTCATACTATGTGCAAGGATTAGTGATGCAAAAGAAGTATTTGCAACTGCATTTATCCCTTTAATGATGATCATTGTCGCTATAATGGGCTCCTTTCTTCTCGCTGAGCAAATTTATCTAGAGGGCTTATACTCAGCATTGTGGGGAAAGAATAAGGAACAAATAATGGAGAACAAAGTGACAGATGAGAATTTATCCTTTGCTCTAAAGTGTGTTCACATTATTGACGGAAAAAATTCAAATCAGAATGCTGAAGCACCCAACAAGCTCTTGTCTCTCCCTCATTCTCACATGAATGTTATTAACCAAGAAGAAAATAAAGTTTTAACTTAA 1128 0.3883 MASEKVRRYTKFVENSQLYLAMIFLQFVYGGMNIITKVSLNQGMSHYVLVVYRHVFATVAIAPFAIIFERKHQPRITFPIFIQIFILALLGPVIDQNLYYAGLKFTSPTFACALSNTLPAMTFVMAVLCRMEKMNIKKVRCQAKVMGTVFTVGGAMVMTLYKGPIVEMVWTKHHRTKINNTQISSDKQWFIGSIFIILSTLAWASLFVLQAKVIETYKNHQLSLTSLICFIGIIQATVVTFLMERKTSVWLIGWDMNLLAAAYAHVILCARISDAKEVFATAFIPLMMIIVAIMGSFLLAEQIYLEGLYSALWGKNKEQIMENKVTDENLSFALKCVHIIDGKNSNQNAEAPNKLLSLPHSHMNVINQEENKVLT* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3559 375 PANTHER WAT1-RELATED PROTEIN 12 340 IPR030184 GO:0016021|GO:0022857
Amo20g3559 375 PANTHER WAT1-RELATED PROTEIN 12 340 - -
Amo20g3559 375 Pfam EamA-like transporter family 19 158 IPR000620 GO:0016020|GO:0016021
Amo20g3559 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3559 Amo-Chr20 146054483 146060386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3559 1 369 Nodulin-like Gene Family AT5G07050 54.074 1.28e-141 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3559 - - adu:107471637 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3559 20 146054483 146060386 Amo20g3559 20 146054483 146060386 ECH