Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3555 ATGGATCCCTCTCGCCGAGCACCGCGCTCAGCGATCGACCCCGTCCCCAAGTTCCGCCAAGTCGGGTTCTTCACTCCTGGAGCCCCGCCCGAACGCTCTCAATCGGGTCCACCCGACCCGACACACTCTACTCCCGTTTCCGACGTCTCACAATCCGCCAACTCGCTCTCTCCGGTCATGATCCCTCCGCCGCGCCACCTCTCCGACAATCTCGTCATCAACGCCCGCCCCACGCTTGCGTCCCCTCTCCGCGCAGATTCCCTCGCCGGTGGCGGAGTTAGCAGCTTCGGCGATTTCTTCCCCGCTCCGATGTCGCCGGCGACTCCAGCTTCTTCTTCGTACTCCAGCAGGATGGCCGCCGGCGAAGGGAGCTTCTTTGAGCGCCATGGTGGCGGAGGCGATAAGGGGAACAATGCCGGCAAAGTGGCGTCGTCATTTCCCCGCGGAGGATTCGACCTGACGGCGATGAAGAAGGTTAGTGGCATTGGCGGTGGCGGTGGTAGTGGCGTTGGTGTTCCGGCAAGTGAGCTGACCACCGTGTCCGTGGTGAATGATTCGCTAGCGATTCATGAAAAAGAGAAAGCAAACAGAGGAGGAGGGTCAGCTGTGGAAGCAAAAGACCAATCTACTGGTTCAAAACAACAAAAACCAAAGACCACAAAAGCTGAAAGGCGAGCTCTTCAAGAATCTCAACGTGCCGCAAAGGCTGCTGCAAAAGCTGAAGGCAACAAGGCATCTGGAGCTGCAACTTCAGTGAATGCAAAACCAGCCAAAGCTGCCAAGCCCACACCAAAAGTTGATAATGCTGCAGTTGCAGCATCTGAGAAGAAGGGTGGTGATTGTCCTCCAGAAAAGGATAGAAAGAAGGATGTTCCTCAACCACGAATGCAATATGATGACAAGAGTCGAGTGGAGAAAGCTAAGCGACGAGCTGTGGTGAAACAAACTGAAGCTAGGAACAGAGTTGAGTTGTTCAGGCATTTACCACAATATGAACACGGAAGTCAGCTTCCAGATCTTGAGTCAAAGTTTTTTCATCTGGATCCTGTACATCCAGCTGTTTATAAGGTGGGTTTGCAGTATCTGTCTGGCGATATATGTGGTGCTAATGCTCGTTGTATTGCAATGTTTCAAGCATTTCAAGAAGCCATAAAAGACTATAGAGTTCCACCTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATAGGTAGTTATGTTTCATTTCTAAATGAGTGTAGGCCTATTTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAAAGTCGGATAGCCAAGCTACCTTTGACCCTGTCTGAGTCAGAAGCCAAAGTTTCTCTCCAGTCAGATATTGAGCGTTTTATAAGTGAGAAGATTGTACTTGCCAACAAGGTGATAGTCAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGATCATCATCGGCAGTTGAAATGATACTGTTACATGCACATGAATTGGGAAAACAGTTTCGTGTTGTTGTAGTTGATTCTCGTCCAAAGCTTAGAGGACAGCTTTTACTTCGGAGGCTTCTGGAGAAGGGTCTTAGCTGTGAATACACTCATATAAATGCTGTTTCATACATAATGCATGAAGTTACCCGAGTTTTTCTGGGTGCTTCGTCAGTGTTGTCTAATGGAACGGTATTTTCAAGGGTTGGGACTGCATGTGTTGCAATGGTTGCTCATGCGTTCCGTGTACCTGTCATAGTATGTTGTGAGGCCTATAAATTTCATGAAAGGGTACAGCTGGATTCGATATGCTCAAATGAACTTGGTGATCCAGATATAATTTCAAATGTTCGGGGTAGAGAGGATGTCAAATACTTGGATGGTTGGGCCAATGTTGAAAATCTACAACTTTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTGCCCCCCACAAGTGTTCCTGTAATTGTAAGAGAATATGGGAGAGAGCAGGTCTGGATTTAA 2028 0.4768 MDPSRRAPRSAIDPVPKFRQVGFFTPGAPPERSQSGPPDPTHSTPVSDVSQSANSLSPVMIPPPRHLSDNLVINARPTLASPLRADSLAGGGVSSFGDFFPAPMSPATPASSSYSSRMAAGEGSFFERHGGGGDKGNNAGKVASSFPRGGFDLTAMKKVSGIGGGGGSGVGVPASELTTVSVVNDSLAIHEKEKANRGGGSAVEAKDQSTGSKQQKPKTTKAERRALQESQRAAKAAAKAEGNKASGAATSVNAKPAKAAKPTPKVDNAAVAASEKKGGDCPPEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLESKFFHLDPVHPAVYKVGLQYLSGDICGANARCIAMFQAFQEAIKDYRVPPEKTLVRDLTAKIGSYVSFLNECRPISISMGNAIRFLKSRIAKLPLTLSESEAKVSLQSDIERFISEKIVLANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGQLLLRRLLEKGLSCEYTHINAVSYIMHEVTRVFLGASSVLSNGTVFSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDIISNVRGREDVKYLDGWANVENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3555 675 MobiDBLite consensus disorder prediction 188 307 - -
Amo20g3555 675 MobiDBLite consensus disorder prediction 1 63 - -
Amo20g3555 675 SUPERFAMILY NagB/RpiA/CoA transferase-like 326 668 IPR037171 -
Amo20g3555 675 MobiDBLite consensus disorder prediction 278 307 - -
Amo20g3555 675 MobiDBLite consensus disorder prediction 123 145 - -
Amo20g3555 675 Gene3D - 461 668 IPR042529 -
Amo20g3555 675 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 675 - -
Amo20g3555 675 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 1 675 - -
Amo20g3555 675 MobiDBLite consensus disorder prediction 37 58 - -
Amo20g3555 675 Pfam Initiation factor 2 subunit family 367 658 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3555 Amo-Chr20 145976208 145981672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3555 4 675 Eukaryotic Initiation Factors Gene Family AT5G38640 64.076 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3555 K03680 - gmx:100775998 1024.23