Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3552 ATGGCGGCTCCACCGGTGGTGAGGTTCCCGATCTTCACGACTGTGAGAGCGTTTGGCGTCGCCGTCACCGTTCTTCTTCTCATTTGGACGCTTCATTTCAGAGGAGGCCTCGCTCTCATCTCTGACAACAAAGATCTCATCTTCAATGTCCATCCAGTGTTGATGGTGATTGGGCTTGTTCTGATCAATGGTGAAGGGATGCTTGCATACAAGACATTATCTGGAACAAAAAGCTTCAGAAAAACAGTGCATCTCACATTGCAGTTTCTGTCTCTAATTTTGAGTTTAATTGGTGTCTGGGCTGCTTGGAAGTTTCACATTGACAAGGGCATTGACAATTTCTACAGCCTGCATTCCTGGTTGGGCCTTGCATGCCTTTTCCTATTCTCCATCCAGTGGGCTGCCGGATTTGTGACATTTTGGTACCCGGGAGGTTCAAGGAATAGCAGAGCTGCGCTTTTGCCATGGCATGTGTTCTTTGGCATCTATATCTATGGTTTGGCTATAGCTACTGCTGCTACTGGTATTTTGGAAAAGGCGACATTCCTTCAGACGAACAATGTTATATCGCGCTATTCCAGCGAAGCACTACTGGTCAATACTTTAGGCATCTTGATTGTCATTTTAGGCGGCTTTGTTATTCTTGGAATCGTTGCTCCATCTGGTGGTAAATCAGAAACCACAAGAGGAAATGAATAA 699 0.4564 MAAPPVVRFPIFTTVRAFGVAVTVLLLIWTLHFRGGLALISDNKDLIFNVHPVLMVIGLVLINGEGMLAYKTLSGTKSFRKTVHLTLQFLSLILSLIGVWAAWKFHIDKGIDNFYSLHSWLGLACLFLFSIQWAAGFVTFWYPGGSRNSRAALLPWHVFFGIYIYGLAIATAATGILEKATFLQTNNVISRYSSEALLVNTLGILIVILGGFVILGIVAPSGGKSETTRGNE* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3552 232 PANTHER CYTOCHROME B561-RELATED 5 230 IPR043205 GO:0016491
Amo20g3552 232 Pfam Eukaryotic cytochrome b561 50 182 IPR006593 -
Amo20g3552 232 PANTHER B561, PUTATIVE-RELATED 5 230 - -
Amo20g3552 232 CDD Cyt_b561_ACYB-1_like 41 184 - -
Amo20g3552 232 ProSiteProfiles Cytochrome b561 domain profile. 14 218 IPR006593 -
Amo20g3552 232 SMART 561_7 50 176 IPR006593 -
Amo20g3552 232 Gene3D - 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3552 Amo-Chr20 145898890 145901609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3552 1 226 Chloroplast and Mitochondria Gene Families AT5G38630 72.124 8.29e-122 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3552 K08360 - gmx:100787570 389.037