Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3549 ATGATTCCCTCCCAAACTCCACCACTCAAATCTAGCAAGCGAAGCAGCCATTCCGTTCCATGCAATAACAACCTCATCCGATTCATTCGACCGGCGATGCCTACCCTCACCGATCGCCGCCGTGTGTCCCCGGACATCGACCTCGACTCCGCCGAGCCGCTGAACTCCGAGCCGGAAATTGACACAGCTCCGACCAACAAAACCCGCCGCCTCGCCGGAAAAAACGGCCTCCGCCACCGCCCTACTCGCCAACGATCTCTCACCAGAGACATCGGTCACGTCGCCGCCGAGACCTACTTGGTCACTAGCCTCACATTCACGCTTCTTCAGTATCTCGGGATTGGTTACCGCTGGATTAAGCAATTACTTGCCCTTGGATGTTACGCCATGCTTCTTATGCCTGGATTTCTACAAGTTGCATACTATTATTACTTCACGAGCAAGGTAAAGCGAAGCATTGTTTATGGGGATCAACCAAGAAACAGGTTGGATTTGTATCTACCGGCTGATATTGATAAGCCCAAGCCAGTTTTGATATTTGTAACTGGAGGAGCATGGATTATTGGGTATAAAGCGTGGGGATCCCTTTTAGGACTACAGTTGGCAGAAAGAGACATTATAGTGGCATGCATTGATTACAGAAATTTTCCTCAAGGAACAATCAGTGACATGGTAAATGATGCTTCTCAAGGAATCTCTTTTGTCATCAATAACATAACTAATTATGGAGGCGATCCTAATAGGATATATTTGATGGGGCAATCTGCTGGTGCTCATATTTCTTCTTGTGCTTTACTGGATCAAGCAATCAAAGAAGTTGGAAAAGGAAATAAAGTTTCTTGGAGCATTTCCCAGCTAAAAGCTTATTTTGGTTTATCTGGAGGATATAACCTACTGGAATTAGTTGATCACTTCCACAATCGTGGCTTGTATCGTTCTATTTTTCTAAGTATCATGGAAGGTGAAGAATCTTTGAAGATATTTTCTCCTGAAATCAAAATTCAAGATCCATGCATCAAAGAATCTATTCCTCTCTTGCCTCCTATATATCTGTACCATGGAACTGCTGACTATTCCATACCATCAGTTGCAAGTGAACGGTTTGCCGAAGCTCTTAAGAAGGCAGGAGCAAGTGTTGAGCTGATTCTCTATGATGGGAAAACTCATACAGATTTGTTCCTCCAAGATCCGTTGCGAGGCGGCAAAGACGACCTATTTGATCATGTAGTTTCTGTGATACATTCCAATGACAAAGATGCTGTTGCAAAGGGTACAACTGCAGCACCAAGAAGAAGATTTGTTCCTGAGATTTTATTACAGATGGCTCGCAAGATCAGTCCCTTCTAA 1347 0.4439 MIPSQTPPLKSSKRSSHSVPCNNNLIRFIRPAMPTLTDRRRVSPDIDLDSAEPLNSEPEIDTAPTNKTRRLAGKNGLRHRPTRQRSLTRDIGHVAAETYLVTSLTFTLLQYLGIGYRWIKQLLALGCYAMLLMPGFLQVAYYYYFTSKVKRSIVYGDQPRNRLDLYLPADIDKPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERDIIVACIDYRNFPQGTISDMVNDASQGISFVINNITNYGGDPNRIYLMGQSAGAHISSCALLDQAIKEVGKGNKVSWSISQLKAYFGLSGGYNLLELVDHFHNRGLYRSIFLSIMEGEESLKIFSPEIKIQDPCIKESIPLLPPIYLYHGTADYSIPSVASERFAEALKKAGASVELILYDGKTHTDLFLQDPLRGGKDDLFDHVVSVIHSNDKDAVAKGTTAAPRRRFVPEILLQMARKISPF* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3549 448 Gene3D alpha/beta hydrolase 142 397 IPR029058 -
Amo20g3549 448 PANTHER ARYLACETAMIDE DEACETYLASE 60 439 - -
Amo20g3549 448 MobiDBLite consensus disorder prediction 40 85 - -
Amo20g3549 448 Pfam BD-FAE 163 372 - -
Amo20g3549 448 SUPERFAMILY alpha/beta-Hydrolases 138 420 IPR029058 -
Amo20g3549 448 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL2-RELATED 60 439 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3549 75 448 Carbohydrate Esterase AT1G26120 66.310 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3549 K15889 - gmx:100788814 657.907