Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3508 ATGGTTGGAGGCCCAACACCTAACCATGTGAAGAAAAGATCAAGAAAGAGCAATGCAATTGGTGCTAATGAGAATGAACCATTGTTGCCAAAGTCTCAAGAAAATTATAACGGTGATGATGATTTTAAAGGATCCTCATTCGCCAGTGCGACCTTCAATTTATCAACCACAATTATTGGTGCTGGGATCATGGCCTTGCCTGCAACCCTCAAAGTGTTGGGGATGGTGCCTGGTCTTATTACTATCACTTTCATGGCTTTCTTGACGGACAAGTCAATCGAATTCATGATCCGATTTTCACGCGCCGGCGGCCTTACTTCTTATGGTGATCTCATGGGGGATGCCTTTGGGAGATATGGAAAAGCTGTGCTTCAAATTAGTGTCATAGTCAACAATGTTGGCATCCTTATTGTTTACATGATTATTATTGGTGATGTGCTATCTGGAACATCTTCAAGTAAAGATCACCATTATGGAATACTTGAAGGATGGTTTGGTGTACATTGGTGGACAGGCCGTACAGTTGTTCTTATTTTTACTACACTTGCTATATTTCTTCCTTTGGTTAGCTTTAAGAGAATTGATTCGTTGAGTTTTACATCGGCACTATCAATTGCACTAGCAGTTGTGTTTCTTGTAGTTGCTGTGGGAATAGCAATTTTCAAGATCATAAGTGGAGGCATTGGAATGCCAAGACTCTTTCCAGTTATTAATGATTTGACAGATTTCTTCCAACTCTTCACTGTAACTCCTATTCTTGTCACTGCCTATATATGCCACTACAATGTTCACAACATAGACAATGAAATGGAGGACCCCTCTCAAATGCATGGAGTTGTAAGGACATCCCTTGCAATGTGTTGTTCAGTGTACCTATTAACAAGCTTCTTTGGTTTCCTCCTATTTGGAGAATCAACTCTTGAAGATGTCCTAGCAAACTTTGACACTGATCTTGGAATCCCTTTCGGCCCTGCGCTTAACGACGCCATTCGATTTAGCTACGCCGCGCACATCATGCTTGTTTTTCCAGTTGTCTTCTATCCCCTGCGAATCAACTTAGATGGCCTCATCTTTTCGTCTTCTTCAAGGCCTTTGCTTCAAGATAACTTGAGATTCACGTCACTAACCTTATCTCTTATTCTTCTAATATTTCTTGGTGCAACCTTAATACCTAGCATTTGGGACACTTTTCAGTTCACTGGAGCAACCGCCACCGTTTTTGTAGGGTTTATTTTCCCGGCTGCCGTCACTCTTAGGGATCGATACGACATTGCAACCAAACAAGACAAGATTCTTTCGGTTATGATGATCATATTGGCAGTATTCTCAAATGTTGTGGCTATATATAGTGATGCCATTGCCTTGGTGAATAAGGATAAAGGCAAAACTTCACGTGAATGA 1401 0.4111 MVGGPTPNHVKKRSRKSNAIGANENEPLLPKSQENYNGDDDFKGSSFASATFNLSTTIIGAGIMALPATLKVLGMVPGLITITFMAFLTDKSIEFMIRFSRAGGLTSYGDLMGDAFGRYGKAVLQISVIVNNVGILIVYMIIIGDVLSGTSSSKDHHYGILEGWFGVHWWTGRTVVLIFTTLAIFLPLVSFKRIDSLSFTSALSIALAVVFLVVAVGIAIFKIISGGIGMPRLFPVINDLTDFFQLFTVTPILVTAYICHYNVHNIDNEMEDPSQMHGVVRTSLAMCCSVYLLTSFFGFLLFGESTLEDVLANFDTDLGIPFGPALNDAIRFSYAAHIMLVFPVVFYPLRINLDGLIFSSSSRPLLQDNLRFTSLTLSLILLIFLGATLIPSIWDTFQFTGATATVFVGFIFPAAVTLRDRYDIATKQDKILSVMMIILAVFSNVVAIYSDAIALVNKDKGKTSRE* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3508 466 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 8 459 - -
Amo20g3508 466 PANTHER AMINO ACID TRANSPORTER 8 459 - -
Amo20g3508 466 MobiDBLite consensus disorder prediction 1 35 - -
Amo20g3508 466 Pfam Transmembrane amino acid transporter protein 44 450 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3508 Amo-Chr20 145252671 145254581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3508 1 462 Amino Acid or Auxin Permease AAAP Family AT3G30390 61.905 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3508 K14207 - gmx:100795222 656.751