Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3491 ATGAACTTGAAGAGATATAGCATAACCTCTACTATATCCACTATCATTTACCTTTCTTTCTTGTTCCTCTCGGACTTATTAGCAATATCCATTGAAGCTTATGTTCCAGTTGATAGCTTCACCGTCGACTGTGGCTCAGCTGGCAAATCCTCCGATGGAGAAAGGTCATGGAACGGAGACATAGACTCAAATCTCTTAACTCTTCAAGACACAAAAACCATCATTGCTCAACCAACCACACAATTTCCTCTTTACCAATTAGCTGAGGACCATGCCACTGTTCTAAAATGGAGCAAGAAAAAGGGAATTGCTGTACAGAGAGACTACGCAGTTATGATCCAAGGCCAAGGGATTACTGAGGACAAGTTTAACCTTTCACTCCAAATGCATCCTTCATCAGACACATGGTACAGCGACCCTTTCTTGAACGGCCTGGAAATCTTCAAAATTAGTGACCCTGCGTCTAATAACCTGGCAGGACCCAACCCTGACCCTATTCCTCATCCATTTGCCCCACCACACCTCTCTGTCTCTCTTCAAATCTCAATCAAGAGGATCATAATAATCATAATAATCTCTGTTGTCCCTGCTGGATTCATTTTTCATTTCATTCTAGTGTTCTTCATCCGTAGAAAACAGAAGACAAAGAGCATAGCCAACACTCAAACCTTATCATTGCCATCCGCTCTTTGTCGTCGATTTTCCTTGGTTGAGATGAAAACATGCACCAATAACTTCGATGAGCTCCTCCTTATCGGAGTGGGAGGGTTTGGCAACGTGTACAAAGGCTACATCGACCAAGGTTCAACACCAGTCGCGATCAAACGGTTAAAACCGGGTTCACAGCAAGGGGTTCACGAATTCAGGACCGAAATTCAGATGCTCTCTCAACTGCGCCATCTCCACCTTGTGTCCCTTATTGGTTACTGCTGTGAGAGCAACGAGATGCTCTTGGTCTATGATTTCATGGATCGAGGAACCTTACAAGATCATCTCTACAACAATAATAATAACCCTTCCCTCTCGTGGAAGCAACGGTTGCATATCTGCATAGGAGCAGCGAAGGGGTTGCATTATCTCCATGCAGGTGCGGTCCACAATATCATTCACCGCGATGTAAAGAGCACCAACATCTTATTGGATGAGAAATGGGTGGCCAAGGTTTCCGATTTCGGCTTGTCCAAAATAGGACCCTCTGGCATTTCAAGAACCCACATTAGCACTGTGGTGAAGGGCAGTCTTGGGTATTTAGATCCAGAATATTATAAACGACAGCGTTTAACTGTGAAATCTGACGTGTACTCCTTCGGAGTAGTGCTGTTTGAGGTGTTGTGTGGGAGGCCGCCTTTGATGAGGACAGTGGAAAAACAACAGATGTCACTTGCTCATTGGGTTGTATGTTGCCATGAAGATGGCACGTTGGATCAGATTGTGGACAAAGCATTAGAGGGTCAGATTGAACCGGAGTGCTTAACGAAGTTTGGTGACATTGCTGTGAGATGTTTGCATGAAGATGGTTCCCAACGACCTTCCATGGATGAAATTGTTTGGTGTTTGGAGTTTGCATTGAAACTGCAAGAGACTGGTGAGACGCATCAAGAGCATCTTGTTACTGCACCTGAAATTCTTGAAATTAGCAATGTGTAA 1647 0.4426 MNLKRYSITSTISTIIYLSFLFLSDLLAISIEAYVPVDSFTVDCGSAGKSSDGERSWNGDIDSNLLTLQDTKTIIAQPTTQFPLYQLAEDHATVLKWSKKKGIAVQRDYAVMIQGQGITEDKFNLSLQMHPSSDTWYSDPFLNGLEIFKISDPASNNLAGPNPDPIPHPFAPPHLSVSLQISIKRIIIIIIISVVPAGFIFHFILVFFIRRKQKTKSIANTQTLSLPSALCRRFSLVEMKTCTNNFDELLLIGVGGFGNVYKGYIDQGSTPVAIKRLKPGSQQGVHEFRTEIQMLSQLRHLHLVSLIGYCCESNEMLLVYDFMDRGTLQDHLYNNNNNPSLSWKQRLHICIGAAKGLHYLHAGAVHNIIHRDVKSTNILLDEKWVAKVSDFGLSKIGPSGISRTHISTVVKGSLGYLDPEYYKRQRLTVKSDVYSFGVVLFEVLCGRPPLMRTVEKQQMSLAHWVVCCHEDGTLDQIVDKALEGQIEPECLTKFGDIAVRCLHEDGSQRPSMDEIVWCLEFALKLQETGETHQEHLVTAPEILEISNV* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3491 548 PANTHER OS07G0166700 PROTEIN 86 536 IPR045272 GO:0004714|GO:0006468
Amo20g3491 548 Gene3D Phosphorylase Kinase; domain 1 231 322 - -
Amo20g3491 548 ProSiteProfiles Protein kinase domain profile. 246 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3491 548 CDD STKc_IRAK 252 516 - -
Amo20g3491 548 PIRSF ILK 69 135 - -
Amo20g3491 548 PIRSF ILK 230 536 - -
Amo20g3491 548 SMART serkin_6 246 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3491 548 PANTHER GPCR KINASE, MITOGEN-ACTIVATED PROTEIN (MAP) KINASE KINASE KINASE 7-RELATED 86 536 - -
Amo20g3491 548 Pfam Protein tyrosine and serine/threonine kinase 252 518 IPR001245 GO:0004672|GO:0006468
Amo20g3491 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 368 380 IPR008271 GO:0004672|GO:0006468
Amo20g3491 548 Gene3D Transferase(Phosphotransferase) domain 1 323 541 - -
Amo20g3491 548 SUPERFAMILY Protein kinase-like (PK-like) 218 521 IPR011009 -
Amo20g3491 548 ProSitePatterns Protein kinases ATP-binding region signature. 252 275 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3491 Amo-Chr20 144892953 144895470 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3491 86 545 Receptor kinase-like Gene Family AT3G51550 50.810 1.24e-157 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo20g3491 PK_Tyr_Ser-Thr 1.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3491 - - adu:107471340 822.002