Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3486 ATGAACTTGAGGAGTTATAGCATAACATCTGCCATATCCACTATCATTTACCTTTCTTTCTTGTTCCTCTCGGACTTAGCCATATCCATTGAAGCTTATGTTCCAGTTGATAGCCACAGCATCAATTGTGGCTCAAGTGGCAAATCCTCCGACGGTGAAAGGTCATGGAACGGAGACATACACTCAAATCTCTTTACTCTTCAACACACAAAGACCATCGTTGCTCAACCAGCCACACAACCTTCTTCGAACAAAGTTCCATATACCAGTGCTAGCTTGTCTAACTCTGAATTCAGTTACTCCTTCCCGGTCACAGCTGGCCGGAAATTTGTTCGTCTCTTCTTCTACCCTGCTTCTTACGCTGCCTTTGACCGTAATAACGCCCTCTTCACGGTCAAATCCGAGGGCTTCACACTCCTTAAGGATTTCAATGCTTCGCTTAACGCTGATGCTGCAAACAGGGACACCATCTTTAAAGAATACATCATCAACGTGGATGATGGGCAGAGGATCAACCTGACCTTCACTCCAAACACATCCCATCCAAATTCTTATGCGTTTGTGAATGGAATTGAGGTGGTTTCCATGCCCAATGATCTCTACTTCTTTGAACCCAGCGGACAACAAGTTGTATTTTTGGGTCATCCAGGCGTCCTATACGAAATGCTAAACAGTAGTGCCCTGCAGACAGACTACAGGATCAAAGTTGGCGGCGTCACAATCACACCTAAAGGTGATACTGGCATGCTCAGGAACTGGGAAGGAAATGATGCCGATTATTTAAGAACGCCAAGTGCTCTGTATAGTCTACCCGGTGATACGACCGGAAAGATGAAAATCACTGTGAGTCCTGATTATGAAGCACCCATTGAGCTTTACAGAACATCACGTGATATGGGCATGAATGGAACCCTCAACCAAATGATAAATTTGACCTGGGAGTTTCCTGTTGATTCTGGCTTCAACTACATGCTTAGGCTTCACTTTTGCGAGCTAGACCCAAACATTATTAAAACCAAGGACAGAATGTTCAACATCTACATAGCAGGCCAGTTAGCTGAGGACCATGCCATTGTTCTAGCATGGAGCAAGGAAAAGGGAATTGCTGTACAGAGAGACTACGCAGTTATGATCCAAGGCCAAGGGATTACTCAGGACAAGTTTAACCTTTCACTCCAAATGCATCCTACATCAGACACACGGTACAGCGACCCTTTCTTGAACGGCCTTGAAATCTTCAAAATTAGTGACCCTGCGTCTAATAGCCTAGCAGGACCCAACCCTGACCCTGTTCCTCATTCATTTGCCCCACCACACTTCTCTGTCTCTGTTCAAATCTCAATCAAGAGGATCATAATAATCATAATAATCTCTGTTGTCCCTGCTGGATTCATTTTTCATTTCATTCTAGTGTTCTTCATCCTTAGAAAACAGAAGAAAAAGACCAGAAAGAGATCTTCCAAAGAAGCCAACACTCAAACWTTACCATTGCCATCCGCTCTTTGTCGTCGATTTTCCTTGGTTGAGATAAAAACAGGCACCAACAACTTCGATGAGCTCCTCCTTATCGGAGTGGGAGGGTTTGGCAACGTGTATAAAGGCTACATTGACGAAGGTTCAACACCAGTTGCGATCAAACGGTTAAAACCGGGTTCACAACAAGGGGTTCAGGAATTCAGGACCGAAATTCAGATGCTCTCTCAACTGCGGCATCTCCACCTTGTGTCCCTCATTGGTTATTGCTGTGAAAGCAACGAGATGCTCTTGGTCTATGATTACATGGATCGAGGAACCTTACAAGATCATCTCTACAACAATAGTAGTAACCCTTCCCTTTCGTGGAAGCAACGGTTGCATATCTGCATAGGAGCAGCGAAGGGGTTGCATTATCTCCATGCAGGTGCGYTCCACAATATCATTCACCGCGATGTAAAGAGCACCAACATCTTARTGGATGAWAAATGGGTGGCCAAGGTTTCDGATTTRGGCTTGTCCAAAATAGGACCCTCTGGCATTTCAATAACCCACATCAGCACTGTGGTGAAGGGCAGTCTTGGGTATTTAGACCCAGAATACTATAAACGACAGCGTTTAACTGTGAAGTCTGACGTGTACTCCTTTGGAGTAGTGCTGTTTGAGGTGCTGTGTGGGAGGCCGTCTTTGATGAGGACAGTGGAAAAACAACAGATGTCACTTGCTCATTGGGCTGTATCTTGTTACGAAGATGGCACGTTGGATCAGATTGTGGACAAAGCATTGAAGGGTCAGATTGCATCGGAATGCTTGACGAAGTTTGGTGAGATTGGTGTGAGATGTTTGCATGAAGATGGTTCCCAACGACCTTCCATGGATGAAATTGTTTGGTGTTTGGAGTTTGCATTGATACTGCAAGAGACTGCTGAGACGCATCAAGAACATCTTCTTACTGCAATTGAAATGCTTGAAATTAGCAATGTATGTGTAACTGTGTAA 2472 0.4442 MNLRSYSITSAISTIIYLSFLFLSDLAISIEAYVPVDSHSINCGSSGKSSDGERSWNGDIHSNLFTLQHTKTIVAQPATQPSSNKVPYTSASLSNSEFSYSFPVTAGRKFVRLFFYPASYAAFDRNNALFTVKSEGFTLLKDFNASLNADAANRDTIFKEYIINVDDGQRINLTFTPNTSHPNSYAFVNGIEVVSMPNDLYFFEPSGQQVVFLGHPGVLYEMLNSSALQTDYRIKVGGVTITPKGDTGMLRNWEGNDADYLRTPSALYSLPGDTTGKMKITVSPDYEAPIELYRTSRDMGMNGTLNQMINLTWEFPVDSGFNYMLRLHFCELDPNIIKTKDRMFNIYIAGQLAEDHAIVLAWSKEKGIAVQRDYAVMIQGQGITQDKFNLSLQMHPTSDTRYSDPFLNGLEIFKISDPASNSLAGPNPDPVPHSFAPPHFSVSVQISIKRIIIIIIISVVPAGFIFHFILVFFILRKQKKKTRKRSSKEANTQTLPLPSALCRRFSLVEIKTGTNNFDELLLIGVGGFGNVYKGYIDEGSTPVAIKRLKPGSQQGVQEFRTEIQMLSQLRHLHLVSLIGYCCESNEMLLVYDYMDRGTLQDHLYNNSSNPSLSWKQRLHICIGAAKGLHYLHAGAXHNIIHRDVKSTNILXDXKWVAKVSDLGLSKIGPSGISITHISTVVKGSLGYLDPEYYKRQRLTVKSDVYSFGVVLFEVLCGRPSLMRTVEKQQMSLAHWAVSCYEDGTLDQIVDKALKGQIASECLTKFGEIGVRCLHEDGSQRPSMDEIVWCLEFALILQETAETHQEHLLTAIEMLEISNVCVTV* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3486 823 Gene3D Transferase(Phosphotransferase) domain 1 594 813 - -
Amo20g3486 823 SUPERFAMILY Protein kinase-like (PK-like) 491 794 IPR011009 -
Amo20g3486 823 Gene3D - 38 197 - -
Amo20g3486 823 Gene3D - 227 416 - -
Amo20g3486 823 Gene3D Phosphorylase Kinase; domain 1 476 593 - -
Amo20g3486 823 SMART serkin_6 517 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3486 823 ProSitePatterns Protein kinases ATP-binding region signature. 523 546 IPR017441 GO:0005524
Amo20g3486 823 CDD STKc_IRAK 523 787 - -
Amo20g3486 823 PANTHER OS07G0166700 PROTEIN 22 806 IPR045272 GO:0004714|GO:0006468
Amo20g3486 823 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 22 806 - -
Amo20g3486 823 Pfam Malectin-like domain 41 415 IPR024788 -
Amo20g3486 823 ProSiteProfiles Protein kinase domain profile. 517 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3486 823 Pfam Protein tyrosine and serine/threonine kinase 523 789 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3486 Amo-Chr20 144795836 144798651 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3486 28 816 Receptor kinase-like Gene Family AT3G51550 46.650 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo20g3486 Malectin_like 1.2e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3486 - - cam:101513730 922.539