Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3480 ATGGCCGCTTCCAACGCTCGCGGCTCCACGAACTCCTTCGGTCACACTGAGATTAACTGGGACAAGCTAGATAAAACGAAGTTCTATGTTGTTGGTGCTGGCCTCTTTACGGGTGTTACGGTGGCTCTCTACCCGGTTTCTGTTGTGAAAACTAGGATGCAGGTTGCTTCAAGGGATACTGTGGAGAGGAATGCATTTTCTGTAGTTAAAGGGCTACTTAAAACAGATGGCATTCCTGGTTTGTATAAAGGGTTCGGCACAGTTATCACCGGAACAATTCCTGCCAGGATCATATTTCTCACTACGTTAGAAACCACGAAGGTGGCTGCCTTCAAGATGCTTGAGCCCCTTACACTGTCTGAGACTACCCAAGCTGCTATAGCGAATGGGGTTGCGGGCATGACATCATCACTTTTGTCACAAGCTGTGTTTGTACCAATTGATGTGATTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGGCATACCCGATATAGTGGGGGTCTAGATGTTGTTCGTAAGGTGTTAAGGGCTGATGGCATCAGGGGATTATATAGAGGGTTTGGTCTATCTGTTATGACTTATTCGCCATCCAGCGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGGTTCATATGGAGAGCCTTGGGACATAGTGCTGAACATGAGGAAGGCACTCCTAGTGTGCCGAAGATTGTATTAGTTCAGGCTACTGGAGGGATCATTGCTGGTGCAACTGCATCCTGCATTACAACCCCATTGGATACCATAAAGACACGGTTACAGGTTATGGGACATGAAAAGACCACCTCTGTAAAACAAGTTGTGAGAGACTTAATCAGTGAGGATGGTTGGAAAGGTCTATATAGAGGCTTGGGCCCAAGATTCTTCAGCATGTCAGCATGGGGTACTTCAATGATATTAGCTTATGAATATTTGAAGCGTTTATGTGCAAAAGATGAATAG 969 0.4592 MAASNARGSTNSFGHTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRMQVASRDTVERNAFSVVKGLLKTDGIPGLYKGFGTVITGTIPARIIFLTTLETTKVAAFKMLEPLTLSETTQAAIANGVAGMTSSLLSQAVFVPIDVISQKLMVQGYSGHTRYSGGLDVVRKVLRADGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFIWRALGHSAEHEEGTPSVPKIVLVQATGGIIAGATASCITTPLDTIKTRLQVMGHEKTTSVKQVVRDLISEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDE* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3480 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 109 IPR018108 -
Amo20g3480 322 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 16 322 - -
Amo20g3480 322 SUPERFAMILY Mitochondrial carrier 21 314 IPR023395 -
Amo20g3480 322 PRINTS Mitochondrial carrier protein signature 41 55 IPR002067 GO:0055085
Amo20g3480 322 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Amo20g3480 322 PRINTS Mitochondrial carrier protein signature 241 263 IPR002067 GO:0055085
Amo20g3480 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 212 IPR018108 -
Amo20g3480 322 Gene3D Mitochondrial carrier domain 30 322 IPR023395 -
Amo20g3480 322 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 16 322 - -
Amo20g3480 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 317 IPR018108 -
Amo20g3480 322 Pfam Mitochondrial carrier protein 33 111 IPR018108 -
Amo20g3480 322 Pfam Mitochondrial carrier protein 236 321 IPR018108 -
Amo20g3480 322 Pfam Mitochondrial carrier protein 126 214 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3480 Amo-Chr20 144508305 144512750 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3480 18 322 Chloroplast and Mitochondria Gene Families AT5G15640 75.570 1.51e-172 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3480 K15121 - gmx:100781796 529.635