Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3469 ATGAACTTAAAGAGTTATAGCATAACCTCTACCATTTACCTTTCTTTCTTATTCCTCTCGGACTTGGCCATATCCATTGAAGCTTATGTTCCAGTTGATAGCTACAGCATCAATTGTGGCTCAAGTGGCAAATCCTCCGACGGTGAAAGGTCATGGAACGGAGACATACACTCAAATCTCTTTACTCTTCAACACACAAAAACCATCGTTGCTCAACCAACCACACAATTTCCTCTTTACCAATTGGCGGAGGACCGCGCGGATGTTCTAAAATGGAGCAAGCAAACGGGAATTGCTGTACAGAGAGACTATGCAGTTACGATTTCAGGGACTACTCAGGATAAGTTTAACCTTTCACTCCAACTGCACGAGGCTCTCCGAGAAGGTCAAAGTCAAACATTACAAGGCGATCCTTTCTTGAACGGCCTTGAAATCTTCAAAATTAGTGACACTGTGTCTAATAGCCTGGCAGGACCCAACCCTGACCCTATTCCTCATCTATTTGCCCCACCACACTTCTCTGTCTCTGTTAAAAGCTCACACAACAGTAGGATCCTAATAATCATAATAATCTCTGTCTCGGCAGTATTCATTTTTCTTTCCAGTGTAGTCTTCTTCCTCCTTAGAAAACAGAAGAAAAATAACATAAAGATATCTTCCAAAGTAGCCAACACTCAAACCTTACCATTGCCATCCGCTCTTTGTCGTCGATTTTCCTTGGTTGAGATGAAAACATGCACCAATAACTTCGATGAACTCCTCCTTATCGGGGTGGGAGGCTTTGGCAACGTGTACAAAGGCTACATCAACGAAGGTTCAACACCAGTCGCGATCAAACGGTTAAAACCGGGTTCACAGCAAGGGGTTCAGGAATTCAGGACCGAAATTCAGATGCTCTCTCAACTGCGCCATCTCCACCTTGTKTCCCTCATTGGTTATTGCTGTGAGAGCAACGAGASGMTWTTGGTCTATGATTTCATGGATCGAGGAACCTTACAAGATCATCTCTACAACAATAATAATAACCCTTCCCTYTCWTGGAAGCAACGGTTGCATATCTGCGTAGGAGCAGCGAAGGGGTTGCATTATCTCCATGCAGGTGCGGTCCACAATATCATTCACCGCGATGTAAAGAGCACCAACATCTTATTGGATGAGAAATGGGTGGCCAAGGTTTCCGATTTCGGCTTGTCCAAAATAGGACCCTCTGGCATTTCAAGAACCCACATTAGCACTGTAGTGAAGGGTAGTCTTGGATACTTAGACCCAGAGTACTATAAACGACAGCGTTTAACTGTGAAGTCTGACGTGTACTCCTTTGGAGTAGTGCTGTTTGAGGTGCTGTGTGGGAGGCCGCCTTTGATGAGGACAGTGGAAAAACAACAGATGTCACTTGCTCATTGGGCTGTATCTTGTTATGAAGATGGCACGTTGGATCAGATTGTGGACAAAGCATTGGAGGGTCAGATTGAACCGGAGTGCTTGACGAAGTTTGGTGACATTGCTGTGAGATGTTTGCATGAAGATGGTTCCCAACGACCTTCCATGGATGAAATTGTTTGGTGTTTGGAGTTTGCACTGAAACTGCATGAGACTGGTGAGACGCATCAAGAACATCTTGTTACTGCACCTGAAATGCTTGAAATTAGCAATGTGTAA 1659 0.4424 MNLKSYSITSTIYLSFLFLSDLAISIEAYVPVDSYSINCGSSGKSSDGERSWNGDIHSNLFTLQHTKTIVAQPTTQFPLYQLAEDRADVLKWSKQTGIAVQRDYAVTISGTTQDKFNLSLQLHEALREGQSQTLQGDPFLNGLEIFKISDTVSNSLAGPNPDPIPHLFAPPHFSVSVKSSHNSRILIIIIISVSAVFIFLSSVVFFLLRKQKKNNIKISSKVANTQTLPLPSALCRRFSLVEMKTCTNNFDELLLIGVGGFGNVYKGYINEGSTPVAIKRLKPGSQQGVQEFRTEIQMLSQLRHLHLVSLIGYCCESNEXXLVYDFMDRGTLQDHLYNNNNNPSLSWKQRLHICVGAAKGLHYLHAGAVHNIIHRDVKSTNILLDEKWVAKVSDFGLSKIGPSGISRTHISTVVKGSLGYLDPEYYKRQRLTVKSDVYSFGVVLFEVLCGRPPLMRTVEKQQMSLAHWAVSCYEDGTLDQIVDKALEGQIEPECLTKFGDIAVRCLHEDGSQRPSMDEIVWCLEFALKLHETGETHQEHLVTAPEMLEISNV* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3469 552 PANTHER GPCR KINASE, MITOGEN-ACTIVATED PROTEIN (MAP) KINASE KINASE KINASE 7-RELATED 81 541 - -
Amo20g3469 552 PANTHER OS07G0166700 PROTEIN 81 541 IPR045272 GO:0004714|GO:0006468
Amo20g3469 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 372 384 IPR008271 GO:0004672|GO:0006468
Amo20g3469 552 Gene3D Phosphorylase Kinase; domain 1 235 326 - -
Amo20g3469 552 CDD STKc_IRAK 256 520 - -
Amo20g3469 552 SMART serkin_6 250 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3469 552 Pfam Protein tyrosine and serine/threonine kinase 256 522 IPR001245 GO:0004672|GO:0006468
Amo20g3469 552 ProSiteProfiles Protein kinase domain profile. 250 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3469 552 ProSitePatterns Protein kinases ATP-binding region signature. 256 279 IPR017441 GO:0005524
Amo20g3469 552 Gene3D Transferase(Phosphotransferase) domain 1 327 544 - -
Amo20g3469 552 SUPERFAMILY Protein kinase-like (PK-like) 216 525 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3469 Amo-Chr20 144364930 144367448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3469 81 549 Receptor kinase-like Gene Family AT3G51550 50.000 1.17e-156 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo20g3469 PK_Tyr_Ser-Thr 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3469 - - adu:107471340 751.51