Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3466 ATGAAACATCCATCTCTCTCAACTTTGCCAACGATATCGTTACCTGAAAATCTAACACCGTTTCTTGATAGATCCGTTATAAAGGACGCGAAAGGACTCGCCCAATCGTTTTCTGACGCGTGGATGAACTTCTCTGGACCAAACAATAGGAGCGTCATGCTCTGGAAAAACAAAAACAACCGTGAAGAAGTCCAGCTCGATAATAATGAGTCGGTTAAAGGCGTGTTTGAATTGAAGCCCTCGCATATTCAGAAGCTCAAGAATTATGTGAAATCCAAAACCGGCATCACTAAGGTTTCAACTTTTTCTGTTACAGTTGCTTATTCATTATCATGCTTAGTGAAAGCAGAACAACCAGAGCAGGAGCAAGTTGCTCTTGTGTTCCCTGTGGATTGTAGATCAAGATTGGAACCAGTGGTTTCTCCAACTTATTTTGGTAACTGCCTCATGGGGCGTTTGGTTTTGGAAGAGACAGAGAAGGTGATGGCAAGCGAGGGGTTCGTTACCGTGCTGAAAGGGATAAGCGAGGTTTTGAATGGATTGGAGAGTGGGGTTTTGAATGACGTAGAGAAATGGCAGAAGAAGATTGAATCTGTTTTTTTGGAAGGAAAGAAGAGAGCGTACTCTATTGCTGGTTCAACCCGGTTCGGGGTTTATGGGGTTGATTTTGGATATGGAAGGCCTAAGAAAGTTGATGTTGCTTCGGTGGATAAAACCGGAGCTTTTGCACTTTCTGAGAGTAGAGATGGTGATGGTGGTGTTGAGATTGCTTTGGCTTTGAAGAAGGAACAAATGGAGGTTTTTTCATCTCTGTTTTATGGAAGCAGGGCAAGCTTTGTTACTTCTATACCTTGGCAATGTCTTGTGGTGTTCTTTGTACCTTTTAATTCGGTGTTCTCGTTGAAACACGCGGGCATACTCCTTGCTTCTGGGGACATTGATCCAAAGCTCCAGTACGGTCCGTGCACCAAAAGGCTGCATGAATACCTTGAAGATGTTTATGCGAAGTCTCTTTCGTCTAATTTATTTCCTTTTTTGGTCCTTGCCGACCAATTCGGCCAATTTCCCGATGATATTAAAATAATTAACGAAATTGGCCATATAGGGGCTAGCCGTTTTCTTATACCGGCTTTTATGTTTTTCCTGTTTCAACAACGAGAGCCGAACTTATAG 1173 0.428 MKHPSLSTLPTISLPENLTPFLDRSVIKDAKGLAQSFSDAWMNFSGPNNRSVMLWKNKNNREEVQLDNNESVKGVFELKPSHIQKLKNYVKSKTGITKVSTFSVTVAYSLSCLVKAEQPEQEQVALVFPVDCRSRLEPVVSPTYFGNCLMGRLVLEETEKVMASEGFVTVLKGISEVLNGLESGVLNDVEKWQKKIESVFLEGKKRAYSIAGSTRFGVYGVDFGYGRPKKVDVASVDKTGAFALSESRDGDGGVEIALALKKEQMEVFSSLFYGSRASFVTSIPWQCLVVFFVPFNSVFSLKHAGILLASGDIDPKLQYGPCTKRLHEYLEDVYAKSLSSNLFPFLVLADQFGQFPDDIKIINEIGHIGASRFLIPAFMFFLFQQREPNL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3466 390 Pfam Transferase family 59 271 - -
Amo20g3466 390 SUPERFAMILY CoA-dependent acyltransferases 97 236 - -
Amo20g3466 390 PANTHER - 9 273 - -
Amo20g3466 390 Gene3D - 67 277 IPR023213 -
Amo20g3466 390 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 9 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3466 Amo-Chr20 144274427 144281350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3466 17 273 Monolignol Biosynthesis Gene Families AT5G48930 22.264 2.38e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3466 - - cam:101513090 267.7