Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3465 ATGATGGCGCAAACGCCACCACCGATCAAAGTCCATGAAGTTTACAAGGTATCGCCGTCACAAACCCCCACCACACAACCACCCCTACCCCTCACCTTCTTCGACACAATATGGCTAAGGCTTCCACCAGTTGAGCGTCTCTTCTTCTACGCATTCCCAAACCCAACCATCTCTTTCTTTGACTCTCTTCTTCCCAATCTCAAACGCTCCCTTGAACTCACTCTCCAACACTTCTTCCCCCTCGCCGGTAACATCACTTGGCCACAACATTCTCCGATTCCTACCATCACCTACGTCCCCGGACATGACTCCGTTTCTCTCACTGTTTCCGAGTCAAACGATGACTTTGACCACATTTCCTCTGACTTCTGTGAGGTTTCCAAACGACGCCGTTTGGTACCTGGCTTGAGCGTTTCCGATGACAAAACCTCCTTGCTCGCATTACAGGTTACTCTCTTTCCAAACTCCGGCTTCGTCATCGGAATAACAACTCACCACGCAGGTGTCGATGGAAACTGTTCAACGGTTTTTGTAAAAGCGTGGGCGTACGCGTGCTCCAAGATCATGGAACATCCATCTCTCTCAACTTTGCCAACGATATCGTTACCTGAAAATCTAACACCGTTTCTTGATAGATCCGTTATAAAGGACGCGAAAGGACTCGCCCAATCGTTTTCTGACGCGTGGATGAACTTCTCTGGACCAAACAATAGGAGCGTCATGCTCTGGGGAAACAAAAACAACCGTGAAGAAGTCCAGCTCGATAATAATGAGTCGGTTAAAGGCGTGTTTGAATTGAAGCCCTCGCATATTCAGAAGCTCAAGAATTATGTGAAATCCAAAACCGGCATCGCTAAGGTTTCAACTTTTTCTGTTACAGTTGCTTATTCATTATCATGCTTAGTGAAAGCAGAACAACCAGAGCAGGAGCAAGTTGCTCTTGTGTTCCCTGTGGATTGTAGATCAAGATTGGAACCAGTGGTTTCTCCAACTTATTTTGGTAACTGCCTCATGGGGCGTTTGGTTTTGGAAGAGACAGAGAAGGTGATGGCAAGCGAGGGGTTCGTTACCGTGCTGAAAGGGATAAGCGAGGTTTTGAATGGATTGGAGAGTGGGGTTTTGAATGACGTAGAGAAATGGCAGAGGAAGATTGAATCTGTTTTTTTGGAAGGAAAGAGAGCGTACTCTATTGCTGGTTCAACCCGGTTCGGGGTTTATGGGGTTGATTTTGGATATGGAAGGCCTAAGAAAGTTGATGTTGCTTCGGTGGATAAAACCGGAGCTTTTGCACTTTCTGAGAGTAGAGATGGTGATGGTGGTGTTGAGATTGCTTTGGCTTTGAAGAAGGAACAAATGGAGGTTTTTTCATCTATTTTTTATAGTCAATTTGAATCTTTTTGA 1401 0.4582 MMAQTPPPIKVHEVYKVSPSQTPTTQPPLPLTFFDTIWLRLPPVERLFFYAFPNPTISFFDSLLPNLKRSLELTLQHFFPLAGNITWPQHSPIPTITYVPGHDSVSLTVSESNDDFDHISSDFCEVSKRRRLVPGLSVSDDKTSLLALQVTLFPNSGFVIGITTHHAGVDGNCSTVFVKAWAYACSKIMEHPSLSTLPTISLPENLTPFLDRSVIKDAKGLAQSFSDAWMNFSGPNNRSVMLWGNKNNREEVQLDNNESVKGVFELKPSHIQKLKNYVKSKTGIAKVSTFSVTVAYSLSCLVKAEQPEQEQVALVFPVDCRSRLEPVVSPTYFGNCLMGRLVLEETEKVMASEGFVTVLKGISEVLNGLESGVLNDVEKWQRKIESVFLEGKRAYSIAGSTRFGVYGVDFGYGRPKKVDVASVDKTGAFALSESRDGDGGVEIALALKKEQMEVFSSIFYSQFESF* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3465 466 PANTHER - 6 465 - -
Amo20g3465 466 Pfam Transferase family 11 459 - -
Amo20g3465 466 Gene3D - 9 241 IPR023213 -
Amo20g3465 466 Gene3D - 256 465 IPR023213 -
Amo20g3465 466 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 6 465 - -
Amo20g3465 466 SUPERFAMILY CoA-dependent acyltransferases 285 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3465 Amo-Chr20 144251555 144253046 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3465 47 460 Monolignol Biosynthesis Gene Families AT5G48930 23.529 4.78e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3465 - - gmx:100800849 476.092