Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3462 ATGGCGGAATCTACTCCAGCATTCTTCAAAGTCCATGAAGTTTACAAAGTTGCGCCGCCACAAGGAACCACCACCACCACAACCACCACCCTTCCCTTAACCTTCTTCGACCTGCTATGGCTAAGGCTTCCCTCCACAGAGCGTCTTTACTTCTACGAATTCCCAAACCCAACATCTTCATTCTTTGACTCTCTTCTTCCCAATCTCAAACACTCCCTTCAACTCACTCTTCAACACTTCTTCCCCCTCGCCGGTAACATCACTTGGCCGCAACATTCTCTGATTCCTGCCATCACCTACGTCCCCGGTCAAGATTCCGTTCCTCTCATCGTATCCGAATCCAACGAAGATTTCAACCACCTTTGTTCCAATCTTTGCCAAGTTTCCAAGTTCCAACAATTAGTACCTCGCTTGAGTATCTCAGATCACAGAGCTTCTTTGCTTGCATTGCAAGTAACCTTGTTCCCGAACTCCGGCTTTTGCATCGGAATAACTACTCACCATGCCGCTTTCGATGGAAACTGCTCAACCATGTTCATGAAAGCATGGGCCTATACGTGCTCCCAGATCTCACATACGCCATCGATGTCACTTCCCGAGAATCTAACACCGTTCTTTGACAGATCGGCCGTAAAGGACCCAAAGCGAATCGCCGAGTTGTTCGCGAAGACATGGTTGAACTTCGGTGGAGAAAACAATAGGAGTCTTAAGATCTTGGARRCAGCCACGGAAKCAAGAACCGATGTAGTTAAAGGGGTGTTTGAATTGAAGACTTCACAAATTCAAAAGCTCAAGAAACATGCAAAAAGCAGTAACTTGGAAACYAAGGTTTCWACTTTTGCGGTYACTAGTGCTTATTTGTTGMATTGCYTGGTGAAAGCAGAGCAACAAGAGTCCAAGAAAGTTGCATTTTTATTCAACGTGGATTGTAGATCCCGTTTGGAACCTCCATTGGGGCCAACATATTTTGGAAACTGCGTGGCGATTCCGTTGATATCGGTAGAGAAAGAGAGGATAGAAGGGAGTGATGGGTTCATAAATGCTCTGAAGATGATAACAGAGGTGTTGTATGATTTGGAGAATAATGATAATGGGGTGTTAAATGGGGCAGAAAATTACATGTTAATGGTTCAATCTGTTGTTGGAGAAGGGAGTAGATTGTACTCACCTTCGGGTTCGCCATGGTTTGGGGTTTATGGGGTTGATTTTGGATTTGGAAAGCCTATAAGAGTTGATGTTGCTTCTGTTAATAAGACAGCTTCGTTTTCTCTTTCTGAAGGTAGGAATGTCGATGGTGGAATTGAGATTGGTTTGGCTCTCACCCAAAATCACATGGAGACTTTTGCTGCTCTTTTTCACCAACAAATTGAAACCTTTTAA 1380 0.4406 MAESTPAFFKVHEVYKVAPPQGTTTTTTTTLPLTFFDLLWLRLPSTERLYFYEFPNPTSSFFDSLLPNLKHSLQLTLQHFFPLAGNITWPQHSLIPAITYVPGQDSVPLIVSESNEDFNHLCSNLCQVSKFQQLVPRLSISDHRASLLALQVTLFPNSGFCIGITTHHAAFDGNCSTMFMKAWAYTCSQISHTPSMSLPENLTPFFDRSAVKDPKRIAELFAKTWLNFGGENNRSLKILEXATEXRTDVVKGVFELKTSQIQKLKKHAKSSNLETKVSTFAVTSAYLLXCLVKAEQQESKKVAFLFNVDCRSRLEPPLGPTYFGNCVAIPLISVEKERIEGSDGFINALKMITEVLYDLENNDNGVLNGAENYMLMVQSVVGEGSRLYSPSGSPWFGVYGVDFGFGKPIRVDVASVNKTASFSLSEGRNVDGGIEIGLALTQNHMETFAALFHQQIETF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3462 459 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 8 458 - -
Amo20g3462 459 Pfam Transferase family 25 450 - -
Amo20g3462 459 Gene3D - 246 459 IPR023213 -
Amo20g3462 459 PANTHER - 8 458 - -
Amo20g3462 459 Gene3D - 9 237 IPR023213 -
Amo20g3462 459 SUPERFAMILY CoA-dependent acyltransferases 253 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3462 Amo-Chr20 144212760 144214320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3462 23 448 Monolignol Biosynthesis Gene Families AT5G48930 27.009 5.05e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3462 - - gmx:100800849 478.789