Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3458 ATGGCCTTTGAGGAATCTGAGCTTATGATTCCGGAGCTAGAAAGAGAGGAAAACCTGATCGCCGCAGCGAGGCACGTTGTGAGGGCATTAGGATCAAAGAAGAATCTCACCGGCGACGCGAAGAAGATTCTAGCAGATCTTGGCACTCAGCTGCGTTCAATTAGCATAGCGAGTTCAAAGGAGAAAGACCTAGAAGATAGGCTCAACGCCATTGAGGAGGTAATAATGAACTGGGAGGAAGATCAGAGCGAGTATTTGAACGCCGCGGACGAAACACGACGGTTGATTGAGAAGTTAGAGAGCTCAACTTTAAGCAAAGAGGACAAAGAATATAAGCTTTTGCATAGAGCTTATAGCATTCTCCAAACCGCTATGTCTCAGCTTGAACAAGTCTTCAAGAGCTTGCTTAGCCAGAACACGCAGCCTTTTGAGCCTGAATACGTGTCGTTTAGAAGTGAAGGTGACTTTTCTGATGAGAATTCAGTGGTGTCGTTCGGTGATGAGTCCGTCGAATCGTTCCGGAGAGACAGTATCAACGATCCGGTTAGTCCAGATGTGATTCTTCATCTTCGGTGCATTGCTAGTTTGATGTTTGCTTCCGGTTATCGCCAGGAATGTTGCCATGCTTATACCATGGCGCGAAGGGAAGCGTTGGAACAATGCTTGGCAATTCTTGAAATTGAAAAACAAAGCATTGAGAATGTCCTGAGAATGGAGTGGACTGCTCTGAATTCCAAGATCAAACGGTGGATTTGGGCCGTGAGAATCTTTGTTAGGGTTTATCTTGCAAGCGAGAAGTGGCTTGCTGACCGGATTTTCGGGGAAGGCGAACCGGTAAGTCAAGTTTGTTTTGTTGATGCATCAAAGTCTTTGATGTTGCAGCTTCTGAATTTCGCCGGAGCCGTTTCAATTGGCCCTCGCAAACCTGAGAAATTGTTCAAGATCCTTGACATGTATGAGGTCCTTTCAAGCCTTGTACCGGAAGTTACCGATTTGTATCAAGACAAGGCCGGTTCGTCCGTTAGGTTCGAATTTCTCGAGGCAATAACCGGATTAGGCGATTGCGTGAAGGCCACGTTTCTTGAATTCGAGCATGCCATTGCCTCGGACGGTGCATCAACTCCTTTTGTTGGAGGCGGAATCCATCCATTAACCAGATATGTGATGAACTATCTTGAAACTTTAACTGACTACGGCGAAAAGCTTAATCATCTTCTCAAGGACAAAGAAGAAACAGAGGAGGGAAAGATGGCGCGCCACTTCCGGTCCGTGGCATCGATCTTAGAATTCAATCTTGATGAGAAATCCAAATTATACAAAGATGTTCCCTTGCAGCACCTCTTCTTAGTGAATAACATCCAGTACATGGCTAGAAAGGTTAAAGGATCTGATGAACTTGGGTCGATTTTCGGAGACGATTGGATCCGAAAGCGCAAATCCAAGTATAGGCAGCATGCAATGRATTACCAGAGAYMTAGTTTGAGTYCAATTCTTTCCTKKCTTAAAGATGATGGAATCCAAATGCAAGGAACTATTAGCAATGTTGGCCCAAAGAATGTTCTTAAAGACAAGTTAAGAAGCTTCTACATTGCATTCGAGGATCTTTATAGGGTCCAAACAGCTTGGAACATTCCAGATATTCAGCTTCGCGAAGAACTGCGAATTTCGCTGTCCTTGAAGGTGGTCCATGCTTATAGAACATTTGTAGGGAGGCATAGTAATCAGATTAGTGAGAAGCACGTTAAATATAGTGCTGAAGATTTAGAAGCTTATATTTTGGATTTCTTTGAGGGAGCTGCAAAATCATTGCAAAGTCCCCGGAAGAAGTAA 1830 0.4415 MAFEESELMIPELEREENLIAAARHVVRALGSKKNLTGDAKKILADLGTQLRSISIASSKEKDLEDRLNAIEEVIMNWEEDQSEYLNAADETRRLIEKLESSTLSKEDKEYKLLHRAYSILQTAMSQLEQVFKSLLSQNTQPFEPEYVSFRSEGDFSDENSVVSFGDESVESFRRDSINDPVSPDVILHLRCIASLMFASGYRQECCHAYTMARREALEQCLAILEIEKQSIENVLRMEWTALNSKIKRWIWAVRIFVRVYLASEKWLADRIFGEGEPVSQVCFVDASKSLMLQLLNFAGAVSIGPRKPEKLFKILDMYEVLSSLVPEVTDLYQDKAGSSVRFEFLEAITGLGDCVKATFLEFEHAIASDGASTPFVGGGIHPLTRYVMNYLETLTDYGEKLNHLLKDKEETEEGKMARHFRSVASILEFNLDEKSKLYKDVPLQHLFLVNNIQYMARKVKGSDELGSIFGDDWIRKRKSKYRQHAMXYQRXSLSXILSXLKDDGIQMQGTISNVGPKNVLKDKLRSFYIAFEDLYRVQTAWNIPDIQLREELRISLSLKVVHAYRTFVGRHSNQISEKHVKYSAEDLEAYILDFFEGAAKSLQSPRKK* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3458 609 Coils Coil 61 81 - -
Amo20g3458 609 Gene3D Exocyst complex component Exo70 66 605 - -
Amo20g3458 609 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 602 IPR004140 GO:0000145|GO:0006887
Amo20g3458 609 Coils Coil 215 235 - -
Amo20g3458 609 SUPERFAMILY Cullin repeat-like 64 597 IPR016159 -
Amo20g3458 609 Pfam Exo70 exocyst complex subunit 248 593 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo20g3458 609 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 23 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3458 Amo-Chr20 144123880 144126169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3458 12 609 EXO70 exocyst subunit family AT3G29400 43.544 7.57e-171 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3458 K07195 - adu:107471287 1158.28