Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3442 ATGGATTTGAGCTTCGACTTCAGTGGTGGATATGATGATTCAGATTGGGTTAGTGAAGAAGAGTACTTCGAAGTGTCCTCCTCGAGTGGGGATGATGAGGACGACCCCATCGACAACGACTCCGATGCGGCTGAGATGGGTGATGACCCCCACGCGAGTGGCATCAGTTCAGATTCGAAGACATGTCTGGGTGATGCTCCTTGTTTTAAGTCGACAGAGGATTTCTTAGACAAGGTGTTCACTACCGAGGAAGATTCATATGCGGCATACAAACAGTTTGCCCCCCTAAGGGGGTTTGGTGTAAGGAAGGGTAACGTGGCTCGAATAAATGGTGTTTTGGTCAGACGAGACTTTTTTTGTCACCGTCAAGGTACAAGGCATGAGAAACACTACGATCGTCCAGAAAAGTATGGGATGAGAGGCTGGAGAGTCGCACAGGTTGTTTAG 447 0.4855 MDLSFDFSGGYDDSDWVSEEEYFEVSSSSGDDEDDPIDNDSDAAEMGDDPHASGISSDSKTCLGDAPCFKSTEDFLDKVFTTEEDSYAAYKQFAPLRGFGVRKGNVARINGVLVRRDFFCHRQGTRHEKHYDRPEKYGMRGWRVAQVV* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3442 148 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 38 130 - -
Amo20g3442 148 MobiDBLite consensus disorder prediction 13 43 - -
Amo20g3442 148 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 130 IPR031052 GO:0006355
Amo20g3442 148 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3442 Amo-Chr20 143889803 143890249 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g3442 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3442 - K17604 ahf:112717862 178.333