Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3433 ATGGAAAACTTGACTTTCCACCCGTTTTCTTTCCCTGAGTTAATAGGCACTGCTGAGGATGGGACTGAAGAAACTGTTTCACTTCTGGAACCTAACAGTTCATTTGGAGAGATATCCATTCTTTGCAACATTCCTCAACCATATACTGTTCGTGTCTGCCAACTCTGTAGGCTCCTGCGGCTTGATAAACAATCGTTTACAAATATCCTTGACATATACTATAATGTCCCAAGTTTTTTTTACTACCGTACCCTCTAA 258 0.4031 MENLTFHPFSFPELIGTAEDGTEETVSLLEPNSSFGEISILCNIPQPYTVRVCQLCRLLRLDKQSFTNILDIYYNVPSFFYYRTL* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3433 85 PANTHER POTASSIUM CHANNEL SKOR 14 76 - -
Amo20g3433 85 Pfam Cyclic nucleotide-binding domain 17 71 IPR000595 -
Amo20g3433 85 CDD CAP_ED 13 73 IPR000595 -
Amo20g3433 85 ProSiteProfiles cAMP/cGMP binding motif profile. 20 70 IPR000595 -
Amo20g3433 85 PANTHER POTASSIUM CHANNEL AKT1 14 76 IPR045319 GO:0005249|GO:0006813
Amo20g3433 85 SUPERFAMILY cAMP-binding domain-like 17 77 IPR018490 -
Amo20g3433 85 Gene3D Jelly Rolls 13 79 IPR014710 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3433 1 75 Ion Channels AT3G02850 61.333 2.91e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3433 K21867 - gmx:100814385 111.309