Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3432 ATGGAGTTTGGATTCTTTCGTGGGTTGCCTGAGAATCTGTTTATATTGGATATCATAGGGCAGCTAGCTTTTCTTGTGGACATATCAAAAACTGAGAAATTTAGGGACAAGATGACAGATCTTATGAAATATATGAATAGAAATAGACTTGGACGGGATATCCGTGAACAAATAAAAGGCCATCTGCTTTTACAGTTTGAGAGTAGCTATACCGAGGCTGCTAGAAAATGGATGGTAAGAAAATAG 246 0.374 MEFGFFRGLPENLFILDIIGQLAFLVDISKTEKFRDKMTDLMKYMNRNRLGRDIREQIKGHLLLQFESSYTEAARKWMVRK* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3432 81 PANTHER POTASSIUM CHANNEL AKT1 29 74 IPR045319 GO:0005249|GO:0006813
Amo20g3432 81 PANTHER POTASSIUM CHANNEL AKT1 1 28 IPR045319 GO:0005249|GO:0006813
Amo20g3432 81 PANTHER POTASSIUM CHANNEL SKOR-LIKE 29 74 - -
Amo20g3432 81 PANTHER POTASSIUM CHANNEL SKOR-LIKE 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3432 Amo-Chr20 143762151 143762819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3432 18 74 Ion Channels AT3G02850 68.966 6.53e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3432 K21867 - gmx:100814385 91.6633