Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3429 ATGGCAGAATCGCAAGAAGAACGTGTTTTAAGCGAGGGTCCTCCTTTATGCACATCACTTTGCCGAAATTCATTAATGGAGGTCAATATAGTTGAACCGTTAGTTTTTGTAGCATCTGGTATTTCAGAAAATTTACCATACGATAGAGAAAACTTAGCCGGCGATGTCGCAGGCCACGATCAGCAGTCGAACAAGGCCCTGCAACCGTCGGATATTAGTGAGGTTGGAAGTGAAGAGATGGAGCTTGGTGACGAGTTACCAGATCATGGTTGCCTTCAAGAAGATGAGATACCAAGAGTTGGCATACGGTTTGCGCAGCTAGAGATGGCTAATGACTTTTATGTTACCTACGCCAAGAAAATAGGATTTGCAACTAAGATACGGACGACAACATATGACAAGATCACAAAGATACCCGTTAACCAAGCTATCCACTGTAATCGCGACGGAATTTGTGGGTCTCGTGTCAAAGCACCAATACGGAAGAATACAATTTTTGCTGCTGGGTGCAAGGCAAGGATATATGTCAAGTTTGACAAAGACATGCAAGATTGGATTTTGTTCAAGGTTGACTTGAGGCACTCGCATCCTTGTTCAGCGAGAAAGGCTGTTCACTACCATGAGTATAGGAAGCTGAGCATGCATGCGAAGTGCGTGATCGAGAATAACGATGAGGCTGGGATTCGACCAAATAAGACCTTCCTAGCTTTGGCAAATGAGGCTGGAGGGCCGTCTAACCTGGGATTCTCAGAAAAATATTTAAGAAACTATATAACAGCGAGGCTCCGAACTAGCAACGTGGATGCTGATGTCAGGGAGATGATGAGCTACTTTATGAGGATGAAGGAGATCAATCCGAACTTCTTTTACGCGGTGAAGCTGGATGAAGATTGTAAATTTAGGAGTGCAGTATGGGTGGATGCAAGGTGTAGGGCGTCATATGAATACTACAGAGATGTCGTGTCTTTTGATAGCACCTACAGTACAAACAGGTATGTAGTAGTTAAGTTGGTGTTTGGTCCTTTAGTTGGTAAAACTCTATTCGATCGTGATTAA 1056 0.4366 MAESQEERVLSEGPPLCTSLCRNSLMEVNIVEPLVFVASGISENLPYDRENLAGDVAGHDQQSNKALQPSDISEVGSEEMELGDELPDHGCLQEDEIPRVGIRFAQLEMANDFYVTYAKKIGFATKIRTTTYDKITKIPVNQAIHCNRDGICGSRVKAPIRKNTIFAAGCKARIYVKFDKDMQDWILFKVDLRHSHPCSARKAVHYHEYRKLSMHAKCVIENNDEAGIRPNKTFLALANEAGGPSNLGFSEKYLRNYITARLRTSNVDADVREMMSYFMRMKEINPNFFYAVKLDEDCKFRSAVWVDARCRASYEYYRDVVSFDSTYSTNRYVVVKLVFGPLVGKTLFDRD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3429 351 Pfam FAR1 DNA-binding domain 112 198 IPR004330 -
Amo20g3429 351 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 68 339 - -
Amo20g3429 351 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 339 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3429 Amo-Chr20 143707203 143709368 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g3429 FAR1 2.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3429 - - ahf:112778726 590.497