Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3414 ATGAGTTTTCCAGWCACTTCCGGCGCCGCCACCGCCGTGGTGGGGGTCGCCTCGTCCGGCCGCCGCGGCATCGGACTGTCGAACACTATCCACTCCGAGGTTGCTCCCTGCCTGCCGCTGCCTTCTCTTCCGGTGTTCTGCGGCTCCTCCGATCGGGACCTCCGCCTAGTTGACTCGCCAGCGATGCTGAACCGTGTCGACGTGCTCGCACAGGCTGGAAAGATCGCTGAGCTGCTCCAGCACACCGATGTGTCGTACTTAAACTTAAGAGATGATAACAGCAGTGGTTCGTATATGTACATTGAGCCATTGGAACTCCATGATGAGGTTCTCAGGTGCAATCCTGAAGCATTTGAATACAGTACCACAGTTTCTCAGGTCCTGTCAAGGAGCAGATCTCTGGTCGTGCGGTGGGTGAGAAGAAGCTCCGTGAGTCAAGTCTTCCTGGCATAA 453 0.5651 MSFPXTSGAATAVVGVASSGRRGIGLSNTIHSEVAPCLPLPSLPVFCGSSDRDLRLVDSPAMLNRVDVLAQAGKIAELLQHTDVSYLNLRDDNSSGSYMYIEPLELHDEVLRCNPEAFEYSTTVSQVLSRSRSLVVRWVRRSSVSQVFLA* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3414 150 PANTHER NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED 22 125 IPR033031 GO:0003682|GO:0010468|GO:0061780
Amo20g3414 150 PANTHER EXPRESSED PROTEIN-RELATED 22 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3414 Amo-Chr20 143465388 143467284 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3414 K06672 - gmx:100797795 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3414 20 143465388 143467284 Amo10g2759 10 92283460 92298290 hybridization