Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3381 ATGAAGAGGATGTTAGCATCTAGCTCACCAGTCATGGTGCTGCTGTTTATGGTCTTTGCTGTGCTTGTCATGTTGCCGGAGGCCTCCGCAAAACGGTGGTTAGTAGGAGACAACATGGGTTGGAACTCTAATGTCAATTACAGTACTTGGGTGAAGGGAAAGCATTTCTACAATGTTTTTGTGTATGATAGGAACCAGATAGATGTACTAGAGGTGAACAAGAAAGACTATGAAAAATGCAATTCTGATCACCCTCTTCACAATTGGACCACCGGTGCCGGAAGAGATGATGTTCCATTAAACATGACTCGAAACTACTACTTCATCAGTGGCAAAGGAGGGTTCTGCTTTAAAGGCATGAAGGTAGCTATCCATGTTGAGAACCTGCCACCTCCACCAAAGGAGGATGACTCACAAATGGCTGATGCACCAGCATTACCCCCAGCAATAGCTGAAGCACCAACACTGGCACAGCCCCCGGTAGAGATCAGAGCACCAGCATCAGCATTACCCCCAACAATAGCCAAGGCAACAAGTCCGGCACAGCCCCCAGCAGAGACTGGAGCACCAACATTTTCCCCAGAAAGGGGTGGAGCACCAACATTGTCCTCAAGAACCCAGGTTCTTGTTATGGCTGTTGTCTTTGCCATTGGGGCAACTTGGGATACATTCATTCATTTCTGTTAG 687 0.4745 MKRMLASSSPVMVLLFMVFAVLVMLPEASAKRWLVGDNMGWNSNVNYSTWVKGKHFYNVFVYDRNQIDVLEVNKKDYEKCNSDHPLHNWTTGAGRDDVPLNMTRNYYFISGKGGFCFKGMKVAIHVENLPPPPKEDDSQMADAPALPPAIAEAPTLAQPPVEIRAPASALPPTIAKATSPAQPPAETGAPTFSPERGGAPTLSSRTQVLVMAVVFAIGATWDTFIHFC* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3381 228 PANTHER LAMIN-LIKE PROTEIN 10 138 - -
Amo20g3381 228 Gene3D - 29 129 IPR008972 -
Amo20g3381 228 PANTHER BLUE COPPER PROTEIN 10 138 IPR039391 GO:0009055
Amo20g3381 228 SUPERFAMILY Cupredoxins 30 126 IPR008972 -
Amo20g3381 228 MobiDBLite consensus disorder prediction 173 200 - -
Amo20g3381 228 ProSiteProfiles Phytocyanin domain profile. 31 128 IPR003245 GO:0009055
Amo20g3381 228 Pfam Plastocyanin-like domain 41 120 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3381 Amo-Chr20 142890216 142891430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3381 5 135 Phytocyanin Superfamily AT5G15350 49.630 1.38e-45 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3381 - - aip:107624469 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3381 20 142890216 142891430 Amo10g2706 10 91612428 91614882 hybridization