Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3251 ATGAAGCTCTCCGGTCAAATCCCTAGCTCCCTCAAATTCTGCGGTAAGAATATCCAGAAGCTGGATCTCGGTTCAAATTCTCTTTCYTCCAATATACCGCCCGAGATCTGCACCTGGATGCAGTTTCTCGTTTCGTTAGATCTCTCCGATAACCAACTTACCGGTCCGATTCCGCCTACTCTTGCTAACTGTACTTACTTGAATGAGCTTGTGCTTAATGATAACGAACTTTCTGGAACCATTCCGTACCAGCTTGGAAGTTTGACTAGGTTGAAGAAGTTATCTGTTGCTAATAACCGTCTTAGCGGAACGGTTCCTTCGTTCTTCAACGGTTTTGATAAGGATGGTTTCGATGGCAACGATGACCTTTGTGGTGGCCCGCTTGGCAACTGCGGTGGCATGAGCAAGAGGAATCTTGCTATAATTGTGGCTGCCGGTGTTTTCGGTGCTGCTGCGTCGTTGCTTTTGGCGTTTGGATTGTGGTGGTACTATCATTTGAGGSTCGGTGGGAGGAGGAAGAAGGGGTTTAGTGGTGGTGGTGGCGGTGGYGGTGGTGGTGGCAATGATTGGGTTGTGAGGTTGAGAGGGCATAAGCTTGTTCAGGTTACGCTTTTTCAGAAGCCGATTGTGAAGGTTAAATTGGGAGATTTAATGGCTGCGACGAATAATTTTAGTGCGGAGAATGTTTTGATTTCGACGAGGACTGGGACTACTTATAAGGCGGATTTGCCRGACGGTTCGGCTCTGGCAGTGAAGAGGTTGAGTGCTTGTAAGATTGGGGAGAAGCAGTTTAGGATGGAGATGAATAGGTTGGGGCAGGTGAGGCACCCGAATTTGGCACCATTGTTGGGTTTCTGTGTAGTGGAGGATGAGAGGTTGTTGGTTTATAAGCACATGTCAAATGGGACTCTTTATTCCTTGCTGCACAAGAATGGAGGGTTGTTGGATTGGATCATGAGGTTTAGGATTGGGGTTGGCGCTGCGAGGGGGCTAGCRTGGCTTCACCATGGCTGCCACCCTCCAATTATTCAGCARAACATTTGTTCYAATGTGATYCTYGTSGACGAGGATTTCGATGCTAGGTTGATGGATTTCGGGCTTGCCAGGCTCATGGCATCGGATTCAAATGGGAGTTTCGTGAATGGGGATTTGGGGGAGTTAGGGTATATTGCACCGGAGTACTCGAGTACCTTGGTTGCTTCATTGAAAGGGGATGTGTATGGATTTGGGGTTTTGCTTTTGGAATTGGTCACAGGGCGAAAACCACTCGATGTTAGCAACGGGGAGGATGAGTTTAAGGGAAACTTGGTGGATTGGGTGAACATGCATTCGAGTATGGGCCGACTCAAGGACTGCATTGATAAGGCCATAGCCGGAAGGGGGCAGGACGAGGAGATCCTGCAGTTTCTGAAAATTGCATCTAATTGTGTGGTTAATCGCCCCAAGGATAGGTGGTCCATGTACAAGGTTTATCATTCATTGAAGAGTTTAAGCAAAGACTCAAGTTTGTTTGATCATGATGACGAGTTCCCCTTGATCTTTGGTAAGCCGGAAAACGAGTAG 1563 0.4741 MKLSGQIPSSLKFCGKNIQKLDLGSNSLSSNIPPEICTWMQFLVSLDLSDNQLTGPIPPTLANCTYLNELVLNDNELSGTIPYQLGSLTRLKKLSVANNRLSGTVPSFFNGFDKDGFDGNDDLCGGPLGNCGGMSKRNLAIIVAAGVFGAAASLLLAFGLWWYYHLRXGGRRKKGFSGGGGGGGGGGNDWVVRLRGHKLVQVTLFQKPIVKVKLGDLMAATNNFSAENVLISTRTGTTYKADLPDGSALAVKRLSACKIGEKQFRMEMNRLGQVRHPNLAPLLGFCVVEDERLLVYKHMSNGTLYSLLHKNGGLLDWIMRFRIGVGAARGLAWLHHGCHPPIIQQNICSNVILVDEDFDARLMDFGLARLMASDSNGSFVNGDLGELGYIAPEYSSTLVASLKGDVYGFGVLLLELVTGRKPLDVSNGEDEFKGNLVDWVNMHSSMGRLKDCIDKAIAGRGQDEEILQFLKIASNCVVNRPKDRWSMYKVYHSLKSLSKDSSLFDHDDEFPLIFGKPENE* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3251 520 Gene3D Transferase(Phosphotransferase) domain 1 299 511 - -
Amo20g3251 520 SUPERFAMILY Protein kinase-like (PK-like) 201 494 IPR011009 -
Amo20g3251 520 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 516 - -
Amo20g3251 520 ProSiteProfiles Protein kinase domain profile. 224 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3251 520 Pfam Protein kinase domain 236 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3251 520 Gene3D Ribonuclease Inhibitor 1 139 IPR032675 -
Amo20g3251 520 SUPERFAMILY L domain-like 9 110 - -
Amo20g3251 520 Gene3D Phosphorylase Kinase; domain 1 186 298 - -
Amo20g3251 520 PANTHER RECEPTOR-LIKE PROTEIN 55 1 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3251 Amo-Chr20 139547092 139549397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3251 1 520 Receptor kinase-like Gene Family AT3G28450 63.188 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Amo20g3251 Pkinase 3.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3251 - - gmx:100810378 828.55