Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3242 ATGAAGAAACAGGAAGAACAGTGTAATAGAGAATTTAAGAAGAAGGAGAACAACATTTCATCACACATCAATTCAAATAACAAGAAAATTGTTTTCCAACATGCTTATAATACAGATGCAACATCAGAATCTGCTATATCTATCAAGAAAATGAGGGCTCATATCACGGATGATGGAGGGAAGATCAAGTTTGGAGATAGATCACATTTGCGAAATGGAACTTTAATAAATCAGCATCCAAGGACACCATTCGCAGTATTAGCTCAAAACTCACAAAACATAAACAATTTGCTAGACGAGCTTCAAATTTGCAATGCCAAGTTTAGAACATTCCTAAAAAGGGATGACCCAAAAATAGATGCATTAATGCAACAAGCAGAGTTGCTGAGCTCACTAGCTCAAAATATTGATACAGAGGACATGGACCAAAGTCTTGAAAACACGTGGAAGGTTCTTCAAGAGTTTTTGAACCGAACCAAAGAAGCAAACAACCCGAAATGCAAGATTCAAGAATTGAGTAGTAATGAGGGAGGCCAGCCATGTTGGAGGCAAATGGATCTGTATGAAGACTCTCCAGCCAGTTCTGAATACAGTACAGGATCAACTATCCTCCCTCTCTCAGCTGGTGACATTATGGAACACTCTTCACACCGGGATATAGAAACTGAAATGAAAACCACACAAATTGAAGATAAGAAAGAAGTAGATGGATGTGAGAGAGGTGTTCTAGTTACTGCAACCCTGGATCAAGATATACTACCGAATTCGGAAGAACAAATAAACAATGATAGCGCTGTTTCTGCCTCATCAAGAGTGGAGTTTGGTTCCCCTGTTCAAGTAACTCCGATATTCAGATCTTTGGCTGCAGGGATTCCCAGCCCACAATTTTCGGAACCCAAACACCTTGGGATTAAACAATTTTAA 924 0.3918 MKKQEEQCNREFKKKENNISSHINSNNKKIVFQHAYNTDATSESAISIKKMRAHITDDGGKIKFGDRSHLRNGTLINQHPRTPFAVLAQNSQNINNLLDELQICNAKFRTFLKRDDPKIDALMQQAELLSSLAQNIDTEDMDQSLENTWKVLQEFLNRTKEANNPKCKIQELSSNEGGQPCWRQMDLYEDSPASSEYSTGSTILPLSAGDIMEHSSHRDIETEMKTTQIEDKKEVDGCERGVLVTATLDQDILPNSEEQINNDSAVSASSRVEFGSPVQVTPIFRSLAAGIPSPQFSEPKHLGIKQF* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3242 307 Coils Coil 87 107 - -
Amo20g3242 307 PANTHER MYB PROTEIN-RELATED 84 299 - -
Amo20g3242 307 PANTHER TRANSCRIPTION FACTOR MYB88 84 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3242 Amo-Chr20 139345041 139346876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3242 13 305 MYB Transcription Factor Family AT1G14350 39.688 1.05e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3242 K09422 - gmx:100807667 344.354