Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3233 ATGGAGAATTTTTATGATATTAAAACATTGAAGATTGGTGGTCATTCAGTATGCTTATTTGGAATATTTGATGGTCATGGTAGTTCTGGTGCTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAATTTTCTTTACTGGTGCCAAATTGGCTATAACAATTGCTCTCTCAGGATCATAAACCAAACAGAAGTGATGAACGGAAGAGGAATTGATGCGTTTAACTATTGA 246 0.3496 MENFYDIKTLKIGGHSVCLFGIFDGHGSSGAAEYLKEHLFDNLMKHPNFLYWCQIGYNNCSLRIINQTEVMNGRGIDAFNY* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3233 81 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 51 - -
Amo20g3233 81 Gene3D - 1 72 IPR036457 -
Amo20g3233 81 PANTHER ALPHABET, ISOFORM E-RELATED 1 51 - -
Amo20g3233 81 SUPERFAMILY PP2C-like 11 54 IPR036457 -
Amo20g3233 81 ProSitePatterns PPM-type phosphatase domain signature. 19 27 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3233 Amo-Chr20 139064976 139072907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3233 1 58 PP2C-type Phosphatase Gene Family AT5G53140 67.241 2.20e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3233 K17506 - gmx:100805795 98.9821