Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3183 GCGGCAGCGCAGCACATTTTAAAGGCGTTGGCGGCAAGCAAGGCTGTCTCCGATGATCTGAGAAAAACTCTCTTGGATTTCGATATTCACCTATCAGCCATGTCCATAGTTGAAAGGAGCATCAAGCAGCTAGAAAGGAAAATTAAATTTGCCGAAGGCAAAATAATGACTTGGAAAGCGAAGAATTCGATGATATGGGACTGCGGTTCCAAGGAATCTTCCGAGTATTTAGAAGCCCACAAGCAATACCTTGAACCGGAATCTTTCGCGAACGAGGCCGGTTCAGTTGATCTGGTTAATCCTGCGTTAATTCCAGATCTCAAGAGCATTGCAAATGTCATGTTCGGTTCCAAGTACCATCAGGAGTTTTGCCAGACTTTCATTTCTTCGAGACGRWACGCCTTGGACGAGTTCTTRGTGGTTCTTGAAATAGAAAGATTCAGCAACGAGAACGTCATGAAAATGGAAGGGAATTGCTTGAATCGCGAGATAAAGAAGTGGATTCGCGCCGTGAAGATAGTCTTTCAGGTGTATCTCGTCGCAGAGAYACGGTTGTGTAAGCAAATTCTTGGAGACTTCAACGACTCTGTTTATCAGTTCTGCTTCGCCGAGATAACTTTGAGTTTRGTGTTGAAACTTTTGAATTTTGGTGAGGCCGTAGCAARGGGAAACCGTTCYCCGGAGAAACTGTTCTGTTTTCTAGACATCTATGAAGTTTTGGAGAATCTCGCTGTCTATGTAGACATTTTGTTCTTTGAAGAATTTGGTTCATTTGTAAGAGATGAGTTTCACAAGCTTCTAAACAAGTTTGGTGAAGCTTCAAAGTTCACATTTTTAGCATTTAAAAATGCTATTGCAAATGATCCTTCAAAGGCGCGATTCCCTGGTGGCGGAGTTCACCATCTTACCAAATATGTAATGAATTTCATCAAGACACTGGCGGAATATGGCGAGGCACTCAACCTTCTCCTGGCGGACGAGACTCCGGCCGACCCAGAAGGCAATGATGACGATGACAGCCATCCTTTGGCTGGCGAATTCTGGTCGGTGGCGGCCACTCTTGAATCCAACCTGATCAGTAAGTCCAAATTGTACAAAGATGTGGCATTGCAACATGTATTCATGATGAATAACATTCACTACATGGTCCAAAAGGCTAAGTCCTCGGAACTAAGCTTAGTGTTCGGCGATCGATGGCTTCGTCGGCACGTTGCCAAGTTCCGAGATAATGCTAGAAGCTATGAGAGGGTAACTTGGGGTCCAATACTCTCTATTCTGAAACAAGAAAACGCTGAATTGAATTGCACTTCTTCGAAGGAAAATCTAAAGAAAAAGTGCAAAGATTTCAATGCTTCTTTTAGTGAAACCTATAGGTCACAAACAGGGTGGTATATTCCAGATACTGAACTCCGTGAAGATGTACAAATCTCAATTTCTCAGAAAGTTGTTCATGCTTACCGGCAATTCACTGGGAGATATTCATCAACCATTGATGAGAAGTGGAAAAAGCACACTGTGGATGATATAGAGAACTATGTATTGGACCTTTTTGTAGGTTCACCAAAATCTTTGCATTATTTTTCATCATCAGCACAGATACTGAAAAGGGATAAGAGTGTTTGA 1623 0.4239 AAAQHILKALAASKAVSDDLRKTLLDFDIHLSAMSIVERSIKQLERKIKFAEGKIMTWKAKNSMIWDCGSKESSEYLEAHKQYLEPESFANEAGSVDLVNPALIPDLKSIANVMFGSKYHQEFCQTFISSRRXALDEFLVVLEIERFSNENVMKMEGNCLNREIKKWIRAVKIVFQVYLVAEXRLCKQILGDFNDSVYQFCFAEITLSLVLKLLNFGEAVAXGNRSPEKLFCFLDIYEVLENLAVYVDILFFEEFGSFVRDEFHKLLNKFGEASKFTFLAFKNAIANDPSKARFPGGGVHHLTKYVMNFIKTLAEYGEALNLLLADETPADPEGNDDDDSHPLAGEFWSVAATLESNLISKSKLYKDVALQHVFMMNNIHYMVQKAKSSELSLVFGDRWLRRHVAKFRDNARSYERVTWGPILSILKQENAELNCTSSKENLKKKCKDFNASFSETYRSQTGWYIPDTELREDVQISISQKVVHAYRQFTGRYSSTIDEKWKKHTVDDIENYVLDLFVGSPKSLHYFSSSAQILKRDKSV* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3183 540 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 10 80 - -
Amo20g3183 540 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 92 525 - -
Amo20g3183 540 SUPERFAMILY Cullin repeat-like 74 517 IPR016159 -
Amo20g3183 540 Pfam Exo70 exocyst complex subunit 165 514 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo20g3183 540 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 80 IPR004140 GO:0000145|GO:0006887
Amo20g3183 540 PANTHER EXOCYST COMPLEX PROTEIN EXO70 92 525 IPR004140 GO:0000145|GO:0006887
Amo20g3183 540 Coils Coil 34 61 - -
Amo20g3183 540 Gene3D Exocyst complex component Exo70 13 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3183 Amo-Chr20 137609173 137610933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3183 97 517 EXO70 exocyst subunit family AT5G61010 47.073 4.75e-131 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3183 K07195 - gmx:100791622 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3183 20 137609173 137610933 Amo20g3183 20 137609173 137610933 ECH