Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3171 ATGGATGAGAGTGAGGTGAATGTGACTGGAAAATGGTCAAGCCCTTATGTTATGAGGGTGAAGATTGCCCTCAGAATTAAGTCCATTGAACATGAAAATTTTGAAGAGAGGTCTAATCCTGCCAGGATCATCCCTGTTTTAATCCACCATGGCAAACCCATCTTCGAGTCTTTTATCATAGTTGAATGGAAAAGTATAGGTGTGTGGATGTTGAATACATTGATTAAACTTGGTCCAATAACAACACCCCTTCAATCCTTCCTTCTGATCCTTATGATAGAGCAATTGCTCGCTTTTGGGCCACTTATATAG 312 0.4006 MDESEVNVTGKWSSPYVMRVKIALRIKSIEHENFEERSNPARIIPVLIHHGKPIFESFIIVEWKSIGVWMLNTLIKLGPITTPLQSFLLILMIEQLLAFGPLI* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3171 103 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 63 - -
Amo20g3171 103 SUPERFAMILY Thioredoxin-like 5 63 IPR036249 -
Amo20g3171 103 Pfam Glutathione S-transferase, N-terminal domain 15 62 IPR004045 -
Amo20g3171 103 Gene3D Glutaredoxin 1 65 - -
Amo20g3171 103 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 63 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3171 Amo-Chr20 137148163 137148650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3171 1 67 Glutathione S-transferase Gene Family AT1G10370 43.373 1.32e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3171 K00799 - cam:101508281 75.8701