Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3168 ATGAGCGAGGCAAGCACTGAATCAAGAAGCTTAAGTTGCCAAGGGGACGATGTTTCTCTGAAGTCCGATGGTATCACCGTCGATTCAAAGACGGATATTGAATTCACCAGCAGTCTAAGATCTGCTGAAATTGAAGATGGCCAGAGCCCATCCTTGAAGGCTATGAAGCAATTGGTTTCACAAACAGTGCAAAAATCATCTGAGAGGTTGGATCAGGATGAGACAATTGCTGAACTTGCAACCGTTGCCCCGGAGAATCCAAGTCCTATGTCATCTCCAGGAAAGAAGATACCGGAAGAGCGAAAAGATAATGAGAATCAAGATCAGTGGAACGCTGCGGATAGCCTTTCTTTTAACAGCTCCGGCGAGATGAATCGCAAGAAACTGCAGAGCATAGATCATCTTGTTCAGAAGCTCAGACGGCTAAACTCTAGTCACGACGAAGCTAGAATCGATTACATTGCTTCGCTATGCGAAAACACAAATCCGGACCACAGATACGTATCTGAAATACTGTTGGCCTCAGGTCTCCTACTCAGAGATCTGAGTTCTGAATTGTTGACATTTCAACTGCACACGTCTGGTCATCCGATTAACCCGGAACTTTTCCTTGTACTGGAGCAGACGAAAGCGAGTAGTTTGCTTGCGAAAGAAGAAAGCACTGGAAAAGTTGCCTACCCGAAGCTAAACGCCGAGAAGTTTCACCGGAAACTCATCTTCGATGCTGTGAACGAGATCCTCGGTGTGAAACTAGGCTCCTCTACTGAGCTATGGTTTCAGCCCAGCACAGTCAAGCTCGCGAAGAAAACCGTTGGCGCGCAAAAGCTTCTCAAAGAACTATGCTTCGAGATAGAGAAAATGCAAGCCAAGAATCATGATTGCAGTTTAGAAGAGGAGGATAGTCTGAAAAGCATGCTAATGGAAGATGTCATGCATGGTTCTGAGAGCTGGACCGAATTCAACCGCGATTTACCCGGGGTTGTGTTGGATGTTGAGAGACTGATATTCAAGGACTTGGTCGACGAGGTTGTGATCGGCGAATCGGTTGGCTTGCGAGTCAAGTCATCGGCGCGGCGGCGGAGGCAGTTTAGGAAGTAG 1098 0.4709 MSEASTESRSLSCQGDDVSLKSDGITVDSKTDIEFTSSLRSAEIEDGQSPSLKAMKQLVSQTVQKSSERLDQDETIAELATVAPENPSPMSSPGKKIPEERKDNENQDQWNAADSLSFNSSGEMNRKKLQSIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYVSEILLASGLLLRDLSSELLTFQLHTSGHPINPELFLVLEQTKASSLLAKEESTGKVAYPKLNAEKFHRKLIFDAVNEILGVKLGSSTELWFQPSTVKLAKKTVGAQKLLKELCFEIEKMQAKNHDCSLEEEDSLKSMLMEDVMHGSESWTEFNRDLPGVVLDVERLIFKDLVDEVVIGESVGLRVKSSARRRRQFRK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3168 365 Pfam Domain of unknown function (DUF4378) 164 342 IPR025486 -
Amo20g3168 365 PANTHER LONGIFOLIA PROTEIN 2 362 - -
Amo20g3168 365 PANTHER LONGIFOLIA PROTEIN 2 362 IPR033334 GO:0051513
Amo20g3168 365 MobiDBLite consensus disorder prediction 1 31 - -
Amo20g3168 365 MobiDBLite consensus disorder prediction 82 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3168 Amo-Chr20 137076007 137077328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3168 1 359 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 50.895 6.87e-94 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3168 - - gmx:100805643 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3168 20 137076007 137077328 Amo20g3168 20 137076007 137077328 ECH