Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3161 ATGGAGTCTATGTTGTTGTCGTCAATCTCAGCATTACTTCTGTTACTGCTCTCTTGCTTCACATTCACTTCTACAGATGCCTATGATGCACTTGATCCAACCGGTAACATAACGATCAAATGGGACGTCATTAGCTGGACTCCAGATGGCTATGTTGCTGTGGTATCAATGTACAATTTCCAACAGTATCGCCATATTCAGGCGCCGGGGTGGTCGTTAGGGTGGTCGTGGGCCAAGAAAGAAGTAATATGGAACATGATGGGAGGGCAGACCACAGAGCAAGGAGACTGCTCAAAGTTCAAAGCAGGCCAACCACATTGCTGTAAAAAGGACCCCCTAGTCGTTGACTTGCTCCCGGGGACTCCTTACAACCAACAGATCGCCAATTGCTGCAAAGGGGGTGTCCTGAGTTCGTGGGCTCAGGACCCCAGCAATGCTGTTAGCTCATTCCAGGTCAGCGTTGGTTCGGCCGGAACAACTAACAGAACGGTCAAGTTGCCGCGAAACTTTACCCTCAAGGCACCTGGTCCTGGATACACTTGTGGCCCTGCAAAGATTGTTAGGCCAACTAAATTTGTTACTAGTGACAAAAGGAGAACCACCCAAGCCTTAATGACTTGGAATGTTACCTGCACATACTCTCAATTCCTGGCTCAAAAGACACCAACTTGTTGTGTTTCCCTGTCATCCTTCTACAATGACACAATAGTAAACTGTCCAACTTGCACCTGCGGCTGCCGGAACAAAACAGCGCCCGGAAGCTGCGTAGATCCAGACTCTACACATTTAGCTTCAGTTGTATCAGGGAAGCCTACGGATACGCCTCTTGTCCAGTGCTCCAGCCACATGTGTCCGATTCGAGTGCATTGGCATGTGAAGCTAAATTACAAGGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAACTACAGAATGAACTACACACAATGGAACCTTGTCGTGCAGCACCCGAATTTTGATAATCTAACTGAGTACTTCAGCTTTAATTACAAGCCACTAATGCCTTATGAAGGCTTAAATGATACTGCTATGCTATGGGGAGTGAAGTTCTACAATGATTTTCTATCTTCAGCTGGACCCCTTGGTAATGTGCAATCAGAACTCTTGTTTAAAAAGGACAAAGAAACCTTCACTTTTGATAAGGGATGGGCTTTCCCAAGAAGGATCTATTTCAATGGAGATAATTGTGTTATGCCTCCTCCTGATGCATATCCTTGGCTTCCAAATTCAAGTTCAAGACTAGTTTTCTCTTTACTAGGCACTTTCATCATAGCCATTTTAGCTTCTCTAATCTCACTGAATTAG 1329 0.453 MESMLLSSISALLLLLLSCFTFTSTDAYDALDPTGNITIKWDVISWTPDGYVAVVSMYNFQQYRHIQAPGWSLGWSWAKKEVIWNMMGGQTTEQGDCSKFKAGQPHCCKKDPLVVDLLPGTPYNQQIANCCKGGVLSSWAQDPSNAVSSFQVSVGSAGTTNRTVKLPRNFTLKAPGPGYTCGPAKIVRPTKFVTSDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCRNKTAPGSCVDPDSTHLASVVSGKPTDTPLVQCSSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYTQWNLVVQHPNFDNLTEYFSFNYKPLMPYEGLNDTAMLWGVKFYNDFLSSAGPLGNVQSELLFKKDKETFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNSSSRLVFSLLGTFIIAILASLISLN* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3161 442 PANTHER PROTEIN COBRA 7 438 IPR006918 GO:0010215|GO:0031225
Amo20g3161 442 Pfam COBRA-like protein 51 214 IPR006918 GO:0010215|GO:0031225
Amo20g3161 442 PANTHER COBRA-LIKE PROTEIN 7 438 - -
Amo20g3161 442 PIRSF COBRA 1 442 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3161 Amo-Chr20 136831044 136834103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3161 13 438 COBRA Gene Family AT3G02210 72.326 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3161 - - gmx:100815779 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3161 20 136831044 136834103 Amo20g3161 20 136831044 136834103 ECH