Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3121 ATGCAGCGTCACAGAGTACCGCACCCTTCTGGTATTCTGTCAAGAGAGCCTCGGCACACATCATTGTCTTGGCCTCATATTCAGCATATGAATCAAGATGCTATAGATGCCGCAATTGTTGGTATGCTTGCTGATCCAAAGGAGGCAAGAGCTGGAATCAGGGAGGTCTATTTTTTCCCTTTCAATTCTGTAGACAAGAGGACTGCTCTAACTTACATTGATTCTGATGAAAATTGGCATAGACCCAGCAAAAGTGCTCCTGATTTGTCGAGCATAGGCTCTGATCTTTGGGGGTTGCTAGACAGTGCGGCAGTGATTACAGCATATTTGATGAGAACGAAAAATCTCTCTCTCGAAGATTTCCTTGAATCATTAAGGAAGAGCTATGAATTTGTTTGTCCCAATGATGGCTTTCTTGAGCAGTTGAGAATGTTCGAGGAGATGGGCTTCAAGGTTGATCACTCCAGTCCTATATATAAGCGCTTTCATCTGTAA 495 0.4343 MQRHRVPHPSGILSREPRHTSLSWPHIQHMNQDAIDAAIVGMLADPKEARAGIREVYFFPFNSVDKRTALTYIDSDENWHRPSKSAPDLSSIGSDLWGLLDSAAVITAYLMRTKNLSLEDFLESLRKSYEFVCPNDGFLEQLRMFEEMGFKVDHSSPIYKRFHL* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3121 164 PANTHER PLASMA MEMBRANE ATPASE 30 88 - -
Amo20g3121 164 Pfam Dual specificity phosphatase, catalytic domain 102 147 IPR000340 GO:0008138|GO:0016311
Amo20g3121 164 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 27 88 IPR023299 GO:0000166
Amo20g3121 164 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 102 149 IPR029021 -
Amo20g3121 164 Gene3D Protein tyrosine phosphatase superfamily 97 164 IPR029021 -
Amo20g3121 164 Gene3D - 18 94 IPR023299 GO:0000166
Amo20g3121 164 PANTHER CALCIUM-TRANSPORTING ATPASE 30 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3121 Amo-Chr20 135674090 135677055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3121 31 88 Primary Pumps ATPases AT2G24520 86.207 1.13e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3121 - - zju:107403964 112.849